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Change the ref of original author of pileup processing script
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This code is copyright (C) 2017 Matthieu Foll, Tiffany Delhomme and Nicolas Alcala, with the following exceptions: | ||
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The perl script bin/pileup2baseindel.pl has been originally written by Jiang Li (original code here: https://github.com/riverlee/pileup2base). | ||
The C++ script mpileup2readcounts has been originally written by Avi Ramu (original code here: https://github.com/gatoravi/mpileup2readcounts). | ||
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The R function glmrob.nb in bin/pileup_nbrr_caller_vcf.r has been originally written by William H. Aeberhard who kindly shared and helped modifying it (original code here: https://github.com/williamaeberhard/glmrob.nb). The method has been published in: | ||
Aeberhard, W. H., Cantoni, E. and Heritier, S. (2014) Robust Inference in the Negative Binomial Regression Model with an Application to Falls Data. Biometrics (70), 920--931 (http://onlinelibrary.wiley.com/doi/10.1111/biom.12212/abstract). |