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Large numebr of BAM files leads to Error in vec_interleave_indices(): #556

Large numebr of BAM files leads to Error in vec_interleave_indices():

Large numebr of BAM files leads to Error in vec_interleave_indices(): #556

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/master/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
issue_comment:
types: [created]
name: Commands
jobs:
document:
if: startsWith(github.event.comment.body, '/document')
name: document
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@v2
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: roxygen2
- name: Document
run: Rscript -e 'roxygen2::roxygenise()'
- name: commit
run: |
git config --local user.name "$GITHUB_ACTOR"
git config --local user.email "[email protected]"
git add man/\* NAMESPACE
git commit -m 'Document'
- uses: r-lib/actions/pr-push@v2
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
style:
if: startsWith(github.event.comment.body, '/style')
name: style
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/pr-fetch@v2
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}
- uses: r-lib/actions/setup-r@v2
- name: Install dependencies
run: Rscript -e 'install.packages("styler")'
- name: Style
run: Rscript -e 'styler::style_pkg()'
- name: commit
run: |
git config --local user.name "$GITHUB_ACTOR"
git config --local user.email "[email protected]"
git add \*.R
git commit -m 'Style'
- uses: r-lib/actions/pr-push@v2
with:
repo-token: ${{ secrets.GITHUB_TOKEN }}