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Multiplex_Major_Patch #285

Multiplex_Major_Patch

Multiplex_Major_Patch #285

Triggered via pull request October 28, 2024 03:06
Status Failure
Total duration 10m 25s
Artifacts 2

check-bioc.yml

on: pull_request
Matrix: build-check
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21 errors and 34 warnings
macOS-latest (4.4)
Running examples in ‘bambu-Ex.R’ failed
macOS-latest (4.4)
+(<dgeMatrix>, <data.table>) is not yet implemented; ask maintainer("Matrix") to implement the missing method
macOS-latest (4.4)
BiocParallel errors
macOS-latest (4.4)
'i' and 'j' must not contain NA
macOS-latest (4.4)
+(<dgeMatrix>, <data.table>) is not yet implemented; ask maintainer("Matrix") to implement the missing method
macOS-latest (4.4)
BiocParallel errors
macOS-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
macOS-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
macOS-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
macOS-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
ubuntu-latest (4.4)
Process completed with exit code 1.
windows-latest (4.4)
R CMD check found ERRORs
windows-latest (4.4)
BiocParallel errors
windows-latest (4.4)
'i' and 'j' must not contain NA
windows-latest (4.4)
+(<dgeMatrix>, <data.table>) is not yet implemented; ask maintainer("Matrix") to implement the missing method
windows-latest (4.4)
BiocParallel errors
windows-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
windows-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
windows-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
windows-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
windows-latest (4.4)
unable to find an inherited method for function 'writeMM' for signature 'obj = "data.table"'
macOS-latest (4.4)
replacing previous import ‘S4Vectors::unname’ by ‘Matrix::unname’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::expand’ by ‘Matrix::expand’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::unname’ by ‘Matrix::unname’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::expand’ by ‘Matrix::expand’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::unname’ by ‘Matrix::unname’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::expand’ by ‘Matrix::expand’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::unname’ by ‘Matrix::unname’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::expand’ by ‘Matrix::expand’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::unname’ by ‘Matrix::unname’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::expand’ by ‘Matrix::expand’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::unname’ by ‘Matrix::unname’ when loading ‘bambu’
macOS-latest (4.4)
replacing previous import ‘S4Vectors::expand’ by ‘Matrix::expand’ when loading ‘bambu’
macOS-latest (4.4)
Found the following significant warnings:
macOS-latest (4.4)
Undocumented code objects:
macOS-latest (4.4)
Codoc mismatches from Rd file 'bambu.Rd':
macOS-latest (4.4)
harfbuzz 10.0.1_1 is already installed and up-to-date. To reinstall 10.0.1_1, run: brew reinstall harfbuzz
macOS-latest (4.4)
fribidi 1.0.16 is already installed and up-to-date. To reinstall 1.0.16, run: brew reinstall fribidi
macOS-latest (4.4)
macOS's Gatekeeper has been disabled for this Cask
ubuntu-latest (4.4)
No files were found with the provided path: check. No artifacts will be uploaded.
windows-latest (4.4)
replacing previous import 'S4Vectors::unname' by 'Matrix::unname' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::expand' by 'Matrix::expand' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::unname' by 'Matrix::unname' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::expand' by 'Matrix::expand' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::unname' by 'Matrix::unname' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::expand' by 'Matrix::expand' when loading 'bambu'
windows-latest (4.4)
Found the following significant warnings:
windows-latest (4.4)
Undocumented code objects:
windows-latest (4.4)
Codoc mismatches from Rd file 'bambu.Rd':
windows-latest (4.4)
replacing previous import 'S4Vectors::unname' by 'Matrix::unname' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::expand' by 'Matrix::expand' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::unname' by 'Matrix::unname' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::expand' by 'Matrix::expand' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::unname' by 'Matrix::unname' when loading 'bambu'
windows-latest (4.4)
replacing previous import 'S4Vectors::expand' by 'Matrix::expand' when loading 'bambu'

Artifacts

Produced during runtime
Name Size
Windows-biocversion-RELEASE-r-4.4-results
6.71 MB
macOS-biocversion-RELEASE-r-4.4-results
6.64 MB