Mastering Python for Bioinformatics

This is the repository for the book Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889).

See O'Reilly's website for a free dowload of the preface and first chapter.

Author

Name	Name	Last commit message	Last commit date
Latest commit kyclark fixed wget command Jul 14, 2021 6588892 · Jul 14, 2021 History 136 Commits
01_dna	01_dna	revisions	Feb 4, 2021
02_rna	02_rna	gzip reader	Jan 30, 2021
03_revc	03_revc	updating READMEs	Jan 30, 2021
04_fib	04_fib	removed unused variable	Feb 11, 2021
05_gc	05_gc	revisions	Feb 4, 2021
06_hamm	06_hamm	cleanup	Feb 11, 2021
07_prot	07_prot	cleanup	Mar 23, 2021
08_subs	08_subs	cleanup	Mar 23, 2021
09_grph	09_grph	updating READMEs	Jan 30, 2021
10_lcsm	10_lcsm	cleanup	Mar 23, 2021
11_mprt	11_mprt	fixed wget command	Jul 14, 2021
12_mrna	12_mrna	link	Jun 19, 2021
13_revp	13_revp	cleanup	Feb 27, 2021
14_orf	14_orf	cleanup	Feb 27, 2021
15_seqmagique	15_seqmagique	fixing for mypy	Feb 12, 2021
16_fastx_grep	16_fastx_grep	fixes for pylint	Feb 12, 2021
17_synth	17_synth	link	Jun 19, 2021
18_fastx_sampler	18_fastx_sampler	link	Jun 19, 2021
19_blastomatic	19_blastomatic	link	Jun 19, 2021
app01_makefiles	app01_makefiles	link	Jun 19, 2021
bin	bin	making docker env happy	Oct 24, 2020
docker	docker	removing synth.py	Feb 9, 2021
.gitignore	.gitignore	ignore	Oct 17, 2020
LICENSE	LICENSE	initial commit	Oct 17, 2020
Makefile	Makefile	initial commit	Oct 17, 2020
README.md	README.md	Merge branch 'main' of github.com:kyclark/biofx_python	Jun 19, 2021
SETUP.md	SETUP.md	new stuff	Dec 3, 2020
mypy.ini	mypy.ini	rename dot files	Oct 29, 2020
pylintrc	pylintrc	another disable	Feb 12, 2021
requirements.txt	requirements.txt	fixes	Feb 6, 2021