v0.13.1

GeometricFlux v0.13.1

Diff since v0.13.0

• GraphParallel support positional_layer

Merged pull requests:

• GraphParallel support positional_layer (#319) (@yuehhua)

v0.13.0

GeometricFlux v0.13.0

Diff since v0.12.4

• implement EEquivGraphConv layer with nested design
• support positional encoding from GraphSignals
• add LSPE

Merged pull requests:

• Support LSPE (#306) (@yuehhua)
• WithGraph supports positional encoding (#311) (@yuehhua)
• Refactor (#315) (@yuehhua)
• Correct EEquivGraphConv by vgsatorras/egnn (#316) (@yuehhua)
• New features: positional encoding (#317) (@yuehhua)

v0.12.4

GeometricFlux v0.12.4

Diff since v0.12.3

• replace ADAM as Adam

Merged pull requests:

• Replace ADAM as Adam (#314) (@yuehhua)

v0.12.3

GeometricFlux v0.12.3

Diff since v0.12.2

• update doc for graph network

Merged pull requests:

• Update doc for graph network (#313) (@yuehhua)

v0.12.2

GeometricFlux v0.12.2

Diff since v0.12.1

• replace Zygote.ignore as ChainRulesCore.ignore_derivatives

Merged pull requests:

• Egnn (#304) (@emsal0)
• Add EEquivGraphPE layer and introduce nested EEquivGraphConv (#308) (@yuehhua)
• Replace Zygote.ignore as ChainRulesCore.ignore_derivatives (#312) (@yuehhua)

v0.12.1

GeometricFlux v0.12.1

Diff since v0.12.0

• remove @deprecate

Merged pull requests:

• Remove @deprecate (#302) (@yuehhua)

v0.12.0

GeometricFlux v0.12.0

Diff since v0.11.1

• add roadmap
• add SAGEConv layer
• support dynamic graph update

Closed issues:

• Subgraph update (#74)
• Implementation of GraphSAGE (#124)
• Add sampling functionality (#159)
• Create Datasets (#287)

Merged pull requests:

• Fix doc test due to Flux update (#288) (@yuehhua)
• Update compact (#291) (@yuehhua)
• Update docs (#294) (@yuehhua)
• Add SAGEConv (#295) (@yuehhua)
• Add dynamic graph update mechanism (#298) (@yuehhua)
• Add roadmap (#299) (@yuehhua)
• Add GraphSAGE to doc (#301) (@yuehhua)

v0.11.1

GeometricFlux v0.11.1

Diff since v0.11.0

• fix link

Merged pull requests:

• Fix doc link (#285) (@yuehhua)

v0.11.0

GeometricFlux v0.11.0

Diff since v0.10.1

• Adds GATv2 layer
• add DeepSet model and digit sum example
• fix GAT example
• add tutorials
• replace Flux.destructure by Optimisers.destructure

Closed issues:

• Lack of documentations and tutorials (#3)
• GAT example fails (#43)
• Edge features in GCNConv layer (#77)
• GAT example not working (#135)
• GAT outputs same embedding for all nodes if defined on complete graph (#154)
• Bug with CUDA + GATConv (#185)
• Add examples to FluxBench.jl (#228)
• Implementation of DeepSets (#237)
• Implementation of Set2set (#238)
• gradient for GATConv layer is very slow (#243)
• How do you use bypass_graph with a Flux.Chain? (#248)
• examples/gcn.jl not working (#262)

Merged pull requests:

• Add tests for Gatv2 layer (#267) (@yuehhua)
• Add DeepSet model and example (#278) (@yuehhua)
• Replace Flux.destructure by Optimisers.destructure (#279) (@yuehhua)
• Fix GAT example (#280) (@yuehhua)
• Memory pre-allocation fix for GAT example (#282) (@yuehhua)
• Update docs and fix GATv2Conv (#283) (@yuehhua)

v0.10.1

GeometricFlux v0.10.1

Diff since v0.10.0

• fix VGAE example and correct precision
• implement new message-passing scheme, including GraphConv, GATConv, GatedGraphConv, EdgeConv, GINConv and CGConv layers
• fix tests for GraphNet
• add WithGraph for Chain

Closed issues:

• Compatibility with GraphSignals.jl Check (#263)

Merged pull requests:

• Integrate WithGraph and AbstractGraphLayer (#272) (@yuehhua)
• Update VGAE example (#273) (@yuehhua)
• Implement new GraphConv and new example (#274) (@yuehhua)
• Implement new GATConv layer (#275) (@yuehhua)
• Fix graph convolution layers (#276) (@yuehhua)
• Update docstring and add deprecate (#277) (@yuehhua)