What's Changed
Full Changelog: v2.0.0...v2.1.0
Notable changes
- Add rule and sample info to slurm log files
- Get naming convention of log output dir consistent
- Add pipeline tests
- Speedups
- Allow dynamic inclusion of recal resources - also stop need for user to manually write the flags
- Simplify code
- Functionize code
- Improve documentation
- Fix fastqc/multiqc error
- Fix file path that makes download from google cloud bucket not work
- Discourage using home dir in docs
- Clarify output files
- Remove g.vcf that causes error in vcf_annotation_pipeline