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Update cd_Si.md
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weiol authored Apr 11, 2024
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17 changes: 9 additions & 8 deletions content/cd_Si.md
Original file line number Diff line number Diff line change
Expand Up @@ -29,12 +29,12 @@ First, copy the example folder which contains some of the VASP input files and u
```
```{group-tab} LEONARDO
cp -r /leonardo_scratch/fast/EUHPC_D02_030/vasp_ws2024/examples/cd_Si .
cp -r /leonardo_scratch/fast/EUHPC_TD02_030/vasp_ws2024/examples/cd_Si .
cd cd_Si
also copy the latest POTCAR file for Si
cp /leonardo_scratch/fast/EUHPC_D02_030/vasp_ws2024/potpaw_PBE.64/Si/POTCAR .
cp /leonardo_scratch/fast/EUHPC_TD02_030/vasp_ws2024/potpaw_PBE.64/Si/POTCAR .
```
````
Expand Down Expand Up @@ -115,7 +115,7 @@ Here, investigate the total energy as a function of volume in a similar way as f
```
```{group-tab} LEONARDO
#!/bin/bash
#SBATCH -A EUHPC_D02_030
#SBATCH -A EUHPC_TD02_030
#SBATCH -p boost_usr_prod
#SBATCH --qos=boost_qos_dbg
#SBATCH --time 00:15:00
Expand All @@ -124,7 +124,8 @@ Here, investigate the total energy as a function of volume in a similar way as f
#SBATCH --cpus-per-task=1
#SBATCH --job-name=vaspjob
source /leonardo_scratch/fast/EUHPC_D02_030/vasp_ws2024/VASP-6.4.3-cpu1.sh
module use /leonardo_scratch/fast/EUHPC_TD02_030/vasp_ws2024/modules
module load VASP-6.4.3-cpu1
module load intel-oneapi-compilers/2023.2.1
module load intel-oneapi-mpi/2021.10.0
module load intel-oneapi-mkl/2023.2.0
Expand All @@ -136,9 +137,9 @@ Here, investigate the total energy as a function of volume in a similar way as f
for i in 5.1 5.2 5.3 5.4 5.5 5.6 5.7 ; do
mkdir -p $i
cd $i
cp /software/sse/manual/vasp/POTCARs/PBE/2015-09-21/Si/POTCAR .
cp /software/sse/manual/vasp/training/ws2022/cd_Si/INCAR .
cp /software/sse/manual/vasp/training/ws2022/cd_Si/KPOINTS .
cp /leonardo_scratch/fast/EUHPC_TD02_030/vasp_ws2024/potpaw_PBE.64/Si/POTCAR .
cp /leonardo_scratch/fast/EUHPC_TD02_030/vasp_ws2024/examples/cd_Si/INCAR .
cp /leonardo_scratch/fast/EUHPC_TD02_030/vasp_ws2024/examples/cd_Si/KPOINTS .
cat >POSCAR <<!
cubic diamond Si
$i
Expand Down Expand Up @@ -261,7 +262,7 @@ note that `CHGCAR` is copied from the previous DOS calculation. We can use the s
cp /software/sse2/tetralith_el9/manual/vasp/training/ws2024/fcc_Si_band/KPOINTS .
```
```{group-tab} LEONARDO
cp /leonardo_scratch/fast/EUHPC_D02_030/vasp_ws2024/examples/fcc_Si_band/KPOINTS .
cp /leonardo_scratch/fast/EUHPC_TD02_030/vasp_ws2024/examples/fcc_Si_band/KPOINTS .
```
and edit INCAR such that it looks like
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