Module2/add module2 yamls (#55)

* Add yamls for module2

* Allow for hydra network agnostic config files

* adding yamls

* fixed paths for perlmutter

* Bugfix

* Fix paths, add network agnostic flag

* Make geometry compatible with the two different types of layout file formats:

* Allow disabled channels to be network agnostic

* typo

* Fix dataset labels

* Update default light samples

* Bug fix

* Update adc64_event_generator.py

* Add module3-specific configs

* Remove module3 light reconstruction workflows

* Remove module3 light reconstruction config yamls

* Revert "Remove module3 light reconstruction workflows"

This reverts commit 02582c9.

* Bump python env to 3.11

* Fix typo in event generator

---------

Co-authored-by: Stephen Greenberg <[email protected]>

Author: peter-madigan

.github/workflows/test.yml

@@ -37,7 +37,7 @@ jobs:
       with:
         auto-update-conda: true
         activate-environment: test
-        python-version: "3.9"
+        python-version: "3.11"
         environment-file: test/env.yaml
 
     - name: setup conda (no mpi)
@@ -46,7 +46,7 @@ jobs:
       with:
         auto-update-conda: true
         activate-environment: test
-        python-version: "3.9"
+        python-version: "3.11"
         environment-file: test/env-nompi.yaml
 
     - name: install h5flow (mpi)

env-nompi.yaml

@@ -2,12 +2,12 @@ channels:
   - conda-forge
   - defaults
 dependencies:
-  - python=3.9
+  - python=3.11
   - root
   - scipy
   - scikit-image
   - scikit-learn
   - pip
   - pip:
     - h5flow>=0.1.0
-    - adc64format>=0.0.2
+    - adc64format>=0.0.2