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The Blue Brain Project

Open Source Software produced and used by the Blue Brain Project

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  1. HighFive HighFive Public

    HighFive - Header-only C++ HDF5 interface

    C++ 696 162

  2. Brayns Brayns Public

    Visualizer for large-scale and interactive ray-tracing of neurons

    C++ 291 47

  3. nexus nexus Public

    Blue Brain Nexus - A knowledge graph for data-driven science

    Scala 281 74

  4. BluePyOpt BluePyOpt Public

    Blue Brain Python Optimisation Library

    Python 204 98

  5. CoreNeuron CoreNeuron Public archive

    Simulator optimized for large scale neural network simulations.

    C++ 136 39

  6. NeuroMorphoVis NeuroMorphoVis Public

    A lightweight, interactive, extensible and cross-platform framework for building, visualizing and analyzing digital reconstructions of neuronal morphology skeletons extracted from microscopy stacks.

    Python 129 27

Repositories

Showing 10 of 360 repositories
  • neuroagent Public

    LLM agent made to communicate with different neuroscience related tools

    BlueBrain/neuroagent’s past year of commit activity
    Python 8 Apache-2.0 0 0 9 Updated Dec 12, 2024
  • BlueBrain/sbo-qa-automation’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Dec 12, 2024
  • appositionizer Public

    Detect physical locations for synapses

    BlueBrain/appositionizer’s past year of commit activity
    C++ 1 Apache-2.0 2 1 1 Updated Dec 12, 2024
  • BlueBrain/Molsys-MetabolicModel’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Dec 12, 2024
  • spack Public Forked from spack/spack

    A flexible package manager that supports multiple versions, configurations, platforms, and compilers.

    BlueBrain/spack’s past year of commit activity
    Python 9 2,337 2 42 Updated Dec 12, 2024
  • neurodamus Public

    A BBP Simulation Control application for NEURON

    BlueBrain/neurodamus’s past year of commit activity
    Python 10 Apache-2.0 8 8 0 Updated Dec 12, 2024
  • region-grower Public

    Neuronal synthesis in atlas-based regions

    BlueBrain/region-grower’s past year of commit activity
    Python 0 Apache-2.0 0 0 2 Updated Dec 11, 2024
  • spacktainers Public
    BlueBrain/spacktainers’s past year of commit activity
    Dockerfile 2 Apache-2.0 0 0 2 Updated Dec 11, 2024
  • BlueBrain/neurodamus-sonata-template’s past year of commit activity
    AGS Script 0 Apache-2.0 0 0 0 Updated Dec 11, 2024
  • functionalizer Public

    Create a functional connectome from physical connections between cells

    BlueBrain/functionalizer’s past year of commit activity
    Python 1 Apache-2.0 0 6 2 Updated Dec 11, 2024