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@BioPAX

BioPAX

BioPAX is a standard language that aims to enable integration, exchange, visualization and analysis of biological pathway data.

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  1. Paxtools Paxtools Public

    The BioPAX Object Model, API and utilities implemented in Java

    Java 25 12

  2. paxtoolsr paxtoolsr Public

    The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular interaction database

    R 10 1

  3. BioPAX.github.io BioPAX.github.io Public

    BioPAX site

    CSS 3 1

  4. validator validator Public

    The BioPAX Validator

    Java 2 2

  5. specification specification Public

    BioPAX specification and examples

    2 4

  6. paxtoolsTutorial paxtoolsTutorial Public

    TeX 2 1

Repositories

Showing 9 of 9 repositories
  • validator Public

    The BioPAX Validator

    BioPAX/validator’s past year of commit activity
    Java 2 MIT 2 3 1 Updated Oct 4, 2024
  • Paxtools Public

    The BioPAX Object Model, API and utilities implemented in Java

    BioPAX/Paxtools’s past year of commit activity
    Java 25 MIT 12 7 0 Updated Jul 4, 2024
  • BioPAX.github.io Public

    BioPAX site

    BioPAX/BioPAX.github.io’s past year of commit activity
    CSS 3 1 0 0 Updated Jun 26, 2024
  • specification Public

    BioPAX specification and examples

    BioPAX/specification’s past year of commit activity
    2 4 3 0 Updated Jun 17, 2024
  • paxtoolsr Public

    The package provides a set of R functions for interacting with BioPAX OWL files using Paxtools and the querying Pathway Commons (PC) molecular interaction database

    BioPAX/paxtoolsr’s past year of commit activity
    R 10 1 6 0 Updated Jan 10, 2023
  • paxtoolsTutorial Public
    BioPAX/paxtoolsTutorial’s past year of commit activity
    TeX 2 1 1 0 Updated Feb 24, 2017
  • biopax Public Forked from cytoscape/biopax

    Core App: BioPAX support

    BioPAX/biopax’s past year of commit activity
    Java 1 LGPL-2.1 3 0 0 Updated Jan 14, 2016
  • biopaxWebConsole Public Forked from cannin/biopaxWebConsole

    Online console for trying out BioPAX Paxtools Java API

    BioPAX/biopaxWebConsole’s past year of commit activity
    JavaScript 0 46 0 0 Updated Oct 29, 2015
  • pattern Public archive

    Deprecated (- moving inside the Paxtools)

    BioPAX/pattern’s past year of commit activity
    1 0 0 0 Updated Aug 20, 2015

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