Pre-release v2.3.3

CHANGELOG.md

@@ -4,7 +4,7 @@ All notable changes to this project will be documented in this file.
 
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/), and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## [2.3.3dev] - 2026-XX-XX : https://github.com/BU-ISCIII/buisciii-tools/releases/tag/2.3.3dev
+## [2.3.3] - 2026-06-22 : https://github.com/BU-ISCIII/buisciii-tools/releases/tag/2.3.3
 
 ### Credits
 
@@ -40,6 +40,7 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
 - Updated several software versions [#696](https://github.com/BU-ISCIII/buisciii-tools/pull/696)
 - Updated nextclade checks for IRMA and viralrecon [#697](https://github.com/BU-ISCIII/buisciii-tools/pull/697)
 - Enabled micromamba env activation when launching a script [#699](https://github.com/BU-ISCIII/buisciii-tools/pull/699)
+- Updated kaiju conf for taxprofiler [#701](https://github.com/BU-ISCIII/buisciii-tools/pull/701)
 
 ### Modules
 

buisciii/__main__.py

@@ -66,7 +66,7 @@ def run_buisciii():
         highlight=False,
     )
 
-    __version__ = "2.3.2"
+    __version__ = "2.3.3"
     stderr.print(
         "[grey39]    BUISCIII-tools version {}".format(__version__), highlight=False
     )

buisciii/templates/taxprofiler/DOC/taxprofiler.config

@@ -18,9 +18,10 @@ process {
 
     withName:'KAIJU_KAIJU' {
         errorStrategy = { task.exitStatus in [143,137,21,1] ? 'retry' : 'finish' }
-        maxRetries    = 3
-        memory = { 72.GB * task.attempt }
-        time = { 8.h }
+        maxRetries    = 4
+        cpus          = 32
+        memory        = { [216.GB, 224.GB, 240.GB, 256.GB][task.attempt - 1] }
+        time          = { 8.h * task.attempt }
     }
 }
 

pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "buisciii-tools"
-version = "2.3.2"
+version = "2.3.3"
 dynamic = ["dependencies"]
 
 authors = [