nmANOVA

Nonmetric Analysis of Variance

Here you can find R files that are needed to reproduce analyses and figures for the manuscript.

nm_ANOVA.R file contains the nmANOVA algorithm as a function of dissimilarity measures and partitions selected for testing.

Name		Name	Last commit message	Last commit date
Latest commit History 26 Commits
Fnm_consistency.R		Fnm_consistency.R
JSD_np_results.RData		JSD_np_results.RData
KL_data.RData		KL_data.RData
KL_gene_expression.R		KL_gene_expression.R
KL_results.RData		KL_results.RData
P_value_uniformity.R		P_value_uniformity.R
Phylogenetic_bipartition.R		Phylogenetic_bipartition.R
README.md		README.md
drug_combination_sensitivity_data.xlsx		drug_combination_sensitivity_data.xlsx
drug_combination_sensitivity_scoring.R		drug_combination_sensitivity_scoring.R
figure1A_p_values.RData		figure1A_p_values.RData
figure1A_p_values_points.RData		figure1A_p_values_points.RData
figure1B_p_values.RData		figure1B_p_values.RData
figure1B_p_values_points.RData		figure1B_p_values_points.RData
figure2B_diss_mat.RData		figure2B_diss_mat.RData
figure2B_p_values.RData		figure2B_p_values.RData
figure2C_data.Rdata		figure2C_data.Rdata
figure2D_data.RData		figure2D_data.RData
nmA_asymprotics.R		nmA_asymprotics.R
nmA_properties_and_applications.R		nmA_properties_and_applications.R
nm_ANOVA.R		nm_ANOVA.R
phylogenetic_bipartition_data.xlsx		phylogenetic_bipartition_data.xlsx
pvclust_significant_partitions.RData		pvclust_significant_partitions.RData

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