Finished debugging refactor

README.md

@@ -8,16 +8,12 @@ The data entry automator is a tool that allows you to automate the process of en
 The program can currently be run from either the command line or via a GUI. 
 
 ### Running the Program
-##### Not Recommended
+#### Not Recommended
 Run the program using the following command:
 ```bash
 java -jar data-entry-automator.jar -i <input file> [options]
 ```
-
-##### Recommended
-Run the program by installing the app using one of releases on the (releases)[https://github.com/AdamW78/Data-Entry-Automator/releases] page. Once installed, navigate to the install location (or create a desktop shortcut) and open the application to access the GUI. The program should look something like:
-
-#### Options
+##### Options
 
 | Argument        | Short Form | Usage                  | Description                                                   | Default Value                         |
 |-----------------|------------|------------------------|---------------------------------------------------------------|---------------------------------------|
@@ -29,6 +25,11 @@ Run the program by installing the app using one of releases on the (releases)[ht
 | `--verbose`     | `-v`       | `--verbose`            | Whether or not verbose output should be printed               | `false`                               |
 | `--help`        | `-h`       | `--help`               | Whether or not helpful usage information should be printed    | `false`                               |
 
+
+#### Recommended
+Run the program by installing the app using one of releases on the [releases](https://github.com/AdamW78/Data-Entry-Automator/releases) page. Once installed, navigate to the installation location (or create a desktop shortcut) and open the application to access the GUI. The program should look something like:
+![GUI Example](images/GUI_screenshot.png)
+
 ### Input
 The input to the data entry automator is a `.xlsx` file with the following columns:
 - `Strain`: The name of the strain

build.gradle

@@ -15,7 +15,7 @@ jlink {
         name = 'DataEntryAutomation'
         jpackage {
             imageName = 'Data Entry Automator'
-            skipInstaller = true
+            // skipInstaller = true
             outputDir = "${layout.buildDirectory.get().asFile}"
             vendor = "Adam Wojciak"
             appVersion = project.version