Troubleshooting

Troubleshoot errors

While using ANGSD-wrapper, you may come across some errors. Please check below to see if your error can be fixed with one of the following solutions. If not, file an issue about the error.

Some common errors you might run into and how to fix them:

Error:

mkdir: cannot create directory `//PCA': Permission denied

Solution for similar errors:

• Check that all your filepaths are correct in your configuration files.
  • Make sure to include ${HOME}/ in front of your filepath or make sure you have the full filepath.
• Check that filepaths do not have spelling errors