Update feature sets

Author: maxrjones

.github/workflows/main.yml

@@ -16,9 +16,6 @@ concurrency:
   group: ${{ github.workflow }}-${{ github.ref }}
   cancel-in-progress: true
 
-env:
-  PIP_ROOT_USER_ACTION: ignore
-
 jobs:
   test:
     name: ${{ matrix.python-version }}-build
@@ -28,29 +25,20 @@ jobs:
         shell: bash -l {0}
     strategy:
       matrix:
-        python-version: ["3.11", "3.12"]
+        environment: [test-py311, test-py312]
     steps:
       - uses: actions/checkout@v4
-
-      - uses: prefix-dev/[email protected]
+      - uses: prefix-dev/[email protected]
         with:
-          pixi-version: v0.39.2
+          pixi-version: v0.41.4
           environments: ${{ matrix.environment }}
-          # we can freeze the environment and manually bump the dependencies to the
-          # latest version time to time.
-          frozen: true
-
-      - name: Install virtualizarr
-        run: |
-           python -m pip install -e . --no-deps
-
       - name: List installed libraries
         run: |
-          pixi list
+          pixi run -e ${{ matrix.environment }} pip list
 
       - name: Running Tests
         run: |
-          pixi run test-xml-cov
+          pixi run -e ${{ matrix.environment }} test-xml-cov
 
       - name: Upload code coverage to Codecov
         uses: codecov/[email protected]

pyproject.toml

@@ -83,20 +83,14 @@ all = [
     "virtualizarr[all_readers]",
     "virtualizarr[all_writers]",
 ]
-
-test = [
-    "codecov",
-    "mypy",
-    "pandas-stubs",
-    "pooch",
-    "pre-commit",
-    "pytest-asyncio",
-    "pytest-cov",
-    "pytest-mypy",
-    "pytest",
-    "ruff",
-    "s3fs",
-    "virtualizarr[all]"
+docs = [
+    "sphinx",
+    "myst_nb",
+    "pydata_sphinx_theme",
+    "sphinx_copybutton",
+    "sphinx_design",
+    "sphinx_togglebutton",
+    "sphinx-autodoc-typehints",
 ]
 
 [project.urls]
@@ -115,23 +109,30 @@ requires = [
 channels = ["conda-forge"]
 platforms = ["win-64", "linux-64", "osx-64", "osx-arm64"]
 
-[tool.pixi.environments]
-default = { solve-group = "default" }
-test = { features = ["test", "remote", "hdf", "hdf5", "netcdf3", "fits", "all", "kerchunk", "icechunk"], solve-group = "default" }
-docs = { features = ["docs"], solve-group = "default" }
+[tool.pixi.pypi-dependencies]
+virtualizarr = { path = ".", editable = true }
 
-[tool.pixi.feature.hdf5.dependencies]
-netcdf4 = ">=1.7.2,<2"
-hdf5 = ">=1.14.4,<2"
-h5netcdf = ">=1.5.0,<2"
+[tool.pixi.feature.py311.dependencies]
+python = "3.11.*"
+
+[tool.pixi.feature.py312.dependencies]
+python = "3.12.*"
 
-[tool.pixi.feature.hdf.dependencies]
+[tool.pixi.feature.hdf5-lib.dependencies]
 netcdf4 = ">=1.7.2,<2"
 hdf5 = ">=1.14.4,<2"
 h5netcdf = ">=1.5.0,<2"
 
-[tool.pixi.pypi-dependencies]
-virtualizarr = { path = ".", editable = true }
+[tool.pixi.feature.test.dependencies]
+codecov = ">=2.1.13,<3"
+mypy = ">=1.15.0,<2"
+pandas-stubs = ">=2.2.3.241126,<3"
+pooch = ">=1.8.2,<2"
+pre-commit = ">=4.1.0,<5"
+pytest-asyncio = ">=0.25.3,<0.26"
+pytest-cov = ">=6.0.0,<7"
+pytest-mypy = ">=0.10.3,<0.11"
+ruff = ">=0.9.9,<0.10"
 
 [tool.pixi.feature.test.tasks]
 test = { cmd = "pytest --run-network-tests" }
@@ -140,6 +141,12 @@ test-cov = { cmd = "pytest --run-network-tests --verbose --cov=virtualizarr --co
 test-xml-cov = { cmd = "pytest --run-network-tests --verbose --cov=virtualizarr --cov-report=xml" }
 test-html-cov = { cmd = "pytest --run-network-tests --verbose --cov=virtualizarr --cov-report=html" }
 
+[tool.pixi.environments]
+test = ["remote", "hdf", "hdf5", "netcdf3", "fits", "icechunk", "kerchunk", "test", "hdf5-lib"]
+test-py311 = ["remote", "hdf", "hdf5", "netcdf3", "fits", "icechunk", "kerchunk", "test", "hdf5-lib", "py311"] # test against python 3.11
+test-py312 = ["remote", "hdf", "hdf5", "netcdf3", "fits", "icechunk", "kerchunk", "test", "hdf5-lib", "py312"] # test against python 3.12
+doc = ["docs"]
+
 [tool.pixi.feature.docs.tasks]
 docs = { cmd = "make html", cwd = "docs" }
 readthedocs = "rm -rf $READTHEDOCS_OUTPUT/html && cp -r docs/_build/html $READTHEDOCS_OUTPUT/html"