From 6e42cad816b46beff59641d5b527e3d2e1ccda47 Mon Sep 17 00:00:00 2001 From: Christopher Carroll Smith Date: Tue, 15 Oct 2024 10:15:13 -0400 Subject: [PATCH 1/6] Updated dependencies and replaced unmaintained clifier dependency with click --- .isort.cfg | 2 +- .pre-commit-config.yaml | 8 +- codegraph/conf/cli.yml | 17 - codegraph/main.py | 48 +- poetry.lock | 1312 ++++++++++++++++++++------------------- pyproject.toml | 15 +- 6 files changed, 710 insertions(+), 692 deletions(-) delete mode 100644 codegraph/conf/cli.yml diff --git a/.isort.cfg b/.isort.cfg index e03dd13..3308f9b 100644 --- a/.isort.cfg +++ b/.isort.cfg @@ -1,2 +1,2 @@ [settings] -known_third_party = clifier,matplotlib,networkx,pytest +known_third_party = click,matplotlib,networkx,pytest diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index edbd040..18133b0 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -4,15 +4,15 @@ repos: hooks: - id: seed-isort-config - repo: https://github.com/pycqa/isort - rev: 5.4.2 + rev: 5.13.2 hooks: - id: isort - repo: https://github.com/ambv/black - rev: stable + rev: 24.10.0 hooks: - id: black - language_version: python3.8 + language_version: python3.12 - repo: https://github.com/PyCQA/flake8 - rev: 3.8.3 + rev: 7.1.1 hooks: - id: flake8 diff --git a/codegraph/conf/cli.yml b/codegraph/conf/cli.yml deleted file mode 100644 index 0880adb..0000000 --- a/codegraph/conf/cli.yml +++ /dev/null @@ -1,17 +0,0 @@ -parser: - prog: 'CodeGraph' - description: 'Tool that create a graph of code to show dependencies between code entities (methods, classes and etc). - CodeGraph does not execute code, it is based only on lex and syntax parse' - -commands: - - keys: ['-v', '--version'] - help: "show CodeGraph version" - action: show_version() - default: True - - keys: ['paths'] - nargs: '*' - help: "Provide path to code base" - - keys: ['-o', '--object-only'] - help: "Provide flag if you don't want to visualise your code dependencies as graph" - action: 'store_true' - default: False \ No newline at end of file diff --git a/codegraph/main.py b/codegraph/main.py index 8ef964f..88e8e69 100644 --- a/codegraph/main.py +++ b/codegraph/main.py @@ -1,27 +1,51 @@ -""" main module of testsdiffer for console (cli) usage""" -import os +""" main module of testsdiffer for console (cli) usage""" + import pprint +import sys -import clifier +import click from codegraph import __version__, core -CLI_CFG_NAME = "conf/cli.yml" - - -def cli(): - config_path = os.path.join(os.path.abspath(os.path.dirname(__file__)), CLI_CFG_NAME) - _cli = clifier.Clifier(config_path, prog_version=__version__) - parser = _cli.create_parser() - args = parser.parse_args() +CONTEXT_SETTINGS = dict(help_option_names=["-h", "--help"]) + + +@click.command(context_settings=CONTEXT_SETTINGS) +@click.version_option(version=__version__, message="CodeGraph version %(version)s") +@click.argument("paths", nargs=-1, type=click.Path(exists=True)) +@click.option( + "-o", + "--object-only", + is_flag=True, + help="Don't visualize code dependencies as graph", +) +def cli(paths, object_only): + """ + Tool that creates a graph of code to show dependencies between code entities (methods, classes, etc.). + CodeGraph does not execute code, it is based only on lex and syntax parsing. + + PATHS: Provide path(s) to code base + """ + if not paths: + click.echo( + "Error: No paths provided. Please specify at least one path to the code base.", + err=True, + ) + sys.exit(1) + + args = {"paths": paths, "object_only": object_only} main(args) def main(args): usage_graph = core.CodeGraph(args).usage_graph() pprint.pprint(usage_graph) - if not args.object_only: + if not args["object_only"]: # to make more quick work if not needed to visualize import codegraph.vizualyzer as vz vz.draw_graph(usage_graph) + + +if __name__ == "__main__": + cli() diff --git a/poetry.lock b/poetry.lock index f23d530..598169f 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,256 +1,688 @@ -[[package]] -name = "attrs" -version = "22.1.0" -description = "Classes Without Boilerplate" -category = "dev" -optional = false -python-versions = ">=3.5" - -[package.extras] -dev = ["cloudpickle", "coverage[toml] (>=5.0.2)", "furo", "hypothesis", "mypy (>=0.900,!=0.940)", "pre-commit", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "sphinx", "sphinx-notfound-page", "zope.interface"] -docs = ["furo", "sphinx", "sphinx-notfound-page", "zope.interface"] -tests = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy (>=0.900,!=0.940)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "zope.interface"] -tests-no-zope = ["cloudpickle", "coverage[toml] (>=5.0.2)", "hypothesis", "mypy (>=0.900,!=0.940)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins"] +# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. 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[tool.poetry.scripts] codegraph = 'codegraph.main:cli' [tool.poetry.group.dev.dependencies] -flake8 = "^5.0.4" -pre-commit = "^2.20.0" +flake8 = "^7.1.1" +pre-commit = "^4.0.1" [build-system] -requires = ["poetry>=0.12"] +requires = ["poetry>=1.8"] build-backend = "poetry.masonry.api" From 858a51364b804ad211a7279bbb0c80e28d7dff78 Mon Sep 17 00:00:00 2001 From: Christopher Carroll Smith Date: Tue, 15 Oct 2024 10:29:47 -0400 Subject: [PATCH 2/6] Make paths OS-agnostic --- codegraph/utils.py | 11 +++++------ tests/test_utils.py | 17 +++++++---------- 2 files changed, 12 insertions(+), 16 deletions(-) diff --git a/codegraph/utils.py b/codegraph/utils.py index 0f01511..d2acdf4 100644 --- a/codegraph/utils.py +++ b/codegraph/utils.py @@ -3,7 +3,7 @@ from typing import List, Union -def get_python_paths_list(paths: Union[str, List]) -> List: +def get_python_paths_list(paths: Union[str, List]) -> List[str]: """ return list of paths to python files, that found in provided path :param paths: paths to folder or python file that need to tests @@ -22,11 +22,10 @@ def get_python_paths_list(paths: Union[str, List]) -> List: for path in paths: path = Path(path).absolute() if not path.exists(): - raise ValueError(f"Path {path.as_posix()} does not exists") - path = path.as_posix() + raise ValueError(f"Path {path.as_posix()} does not exist") paths_list += [ - path - for path in glob.glob(path + "/*", recursive=True) - if path.endswith(".py") and not path.endswith("__init__.py") + Path(p).as_posix() + for p in glob.glob(str(path / "**" / "*.py"), recursive=True) + if not p.endswith("__init__.py") ] return paths_list diff --git a/tests/test_utils.py b/tests/test_utils.py index b03cece..2f3fedb 100644 --- a/tests/test_utils.py +++ b/tests/test_utils.py @@ -12,13 +12,10 @@ def test_get_python_paths_list_error(): def test_get_python_paths_list(): - expected = list( - map( - lambda x: (pathlib.Path(__file__).parents[1] / "codegraph" / x).as_posix(), - ["core.py", "parser.py", "utils.py", "vizualyzer.py", "main.py"], - ) - ) - assert sorted( - get_python_paths_list( - (pathlib.Path(__file__).parents[1] / "codegraph").as_posix() - )) == sorted(expected) + base_path = pathlib.Path(__file__).parents[1] / "codegraph" + expected = [ + (base_path / x).as_posix() + for x in ["core.py", "parser.py", "utils.py", "vizualyzer.py", "main.py"] + ] + result = get_python_paths_list(base_path.as_posix()) + assert sorted(result) == sorted(expected) From 49e2014f603ea5466815c73255fb072bd1ba5806 Mon Sep 17 00:00:00 2001 From: Christopher Carroll Smith Date: Tue, 15 Oct 2024 11:43:50 -0400 Subject: [PATCH 3/6] Removed tests for Python versions <3.12 (because numpy version that comes bundled with 3.12 isn't backward-compatible) --- .github/workflows/main.yml | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index 40a21f5..0250f36 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -10,11 +10,11 @@ jobs: flake8_py3: runs-on: ubuntu-latest steps: - - uses: actions/checkout@v2 - - name: Set up Python 3.8 - uses: actions/setup-python@v2 + - uses: actions/checkout@v4 + - name: Set up Python 3.12 + uses: actions/setup-python@v5 with: - python-version: 3.8 + python-version: 3.12 - name: Install dependencies run: | python -m pip install --upgrade pip @@ -32,11 +32,11 @@ jobs: needs: [flake8_py3] strategy: matrix: - python: [3.8, 3.9, '3.10'] + python: [3.12] steps: - - uses: actions/checkout@v2 + - uses: actions/checkout@v4 - name: Set up Python - uses: actions/setup-python@v2 + uses: actions/setup-python@v5 with: python-version: ${{ matrix.python }} - name: Install dependencies From 51ae1cba7b13c2391d51325d4b09b9cdc347e774 Mon Sep 17 00:00:00 2001 From: Christopher Carroll Smith Date: Tue, 15 Oct 2024 12:01:41 -0400 Subject: [PATCH 4/6] fix: forgot to 'poetry add click' as a dependency! --- codegraph/core.py | 42 +++++++++++++++++++++++++++++++++++++++--- codegraph/main.py | 30 ++++++++++++++++++++++-------- poetry.lock | 16 +++++++++++++++- pyproject.toml | 1 + 4 files changed, 77 insertions(+), 12 deletions(-) diff --git a/codegraph/core.py b/codegraph/core.py index 687b034..2f033ae 100644 --- a/codegraph/core.py +++ b/codegraph/core.py @@ -1,7 +1,7 @@ import os from argparse import Namespace -from collections import defaultdict -from typing import Dict, List, Text, Tuple +from collections import defaultdict, deque +from typing import Dict, List, Set, Text, Tuple from codegraph.parser import Import, create_objects_array from codegraph.utils import get_python_paths_list @@ -36,7 +36,7 @@ def get_code_objects(paths_list: List) -> Dict: class CodeGraph: def __init__(self, args: Namespace): - self.paths_list = get_python_paths_list(args.paths) + self.paths_list = get_python_paths_list(args["paths"]) # get py modules list data self.modules_data = get_code_objects(self.paths_list) @@ -87,6 +87,42 @@ def usage_graph(self) -> Dict: dependencies = populate_free_nodes(self.modules_data, dependencies) return dependencies + def get_dependencies(self, file_path: str, distance: int) -> Dict[str, Set[str]]: + """ + Get dependencies that are 'distance' nodes away from the given file. + + :param file_path: Path of the file to start from + :param distance: Number of edges to traverse + :return: Dictionary with distances as keys and sets of dependent files as values + """ + dependencies = {i: set() for i in range(1, distance + 1)} + graph = self.usage_graph() + + if file_path not in graph: + return dependencies + + queue = deque([(file_path, 0)]) + visited = set() + + while queue: + current_file, current_distance = queue.popleft() + + if current_distance >= distance: + continue + + if current_file not in visited: + visited.add(current_file) + + for entity, used_entities in graph[current_file].items(): + for used_entity in used_entities: + if "." in used_entity: + dependent_file = used_entity.split(".")[0] + ".py" + if dependent_file != current_file: + dependencies[current_distance + 1].add(dependent_file) + queue.append((dependent_file, current_distance + 1)) + + return dependencies + def get_module_name(code_path: Text) -> Text: module_name = os.path.basename(code_path).replace(".py", "") diff --git a/codegraph/main.py b/codegraph/main.py index 88e8e69..4944814 100644 --- a/codegraph/main.py +++ b/codegraph/main.py @@ -19,7 +19,9 @@ is_flag=True, help="Don't visualize code dependencies as graph", ) -def cli(paths, object_only): +@click.option("--file-path", help="File path to start dependency search from") +@click.option("--distance", type=int, help="Distance to search for dependencies") +def cli(paths, object_only, file_path, distance): """ Tool that creates a graph of code to show dependencies between code entities (methods, classes, etc.). CodeGraph does not execute code, it is based only on lex and syntax parsing. @@ -33,18 +35,30 @@ def cli(paths, object_only): ) sys.exit(1) - args = {"paths": paths, "object_only": object_only} + args = { + "paths": paths, + "object_only": object_only, + "file_path": file_path, + "distance": distance, + } main(args) def main(args): - usage_graph = core.CodeGraph(args).usage_graph() - pprint.pprint(usage_graph) - if not args["object_only"]: - # to make more quick work if not needed to visualize - import codegraph.vizualyzer as vz + code_graph = core.CodeGraph(args) + usage_graph = code_graph.usage_graph() - vz.draw_graph(usage_graph) + if args.get("file_path") and args.get("distance"): + dependencies = code_graph.get_dependencies(args["file_path"], args["distance"]) + print(f"Dependencies for {args['file_path']}:") + for distance, files in dependencies.items(): + print(f" Distance {distance}: {', '.join(files)}") + else: + pprint.pprint(usage_graph) + if not args["object_only"]: + import codegraph.vizualyzer as vz + + vz.draw_graph(usage_graph) if __name__ == "__main__": diff --git a/poetry.lock b/poetry.lock index 598169f..d826101 100644 --- a/poetry.lock +++ b/poetry.lock @@ -11,6 +11,20 @@ files = [ {file = "cfgv-3.4.0.tar.gz", hash = "sha256:e52591d4c5f5dead8e0f673fb16db7949d2cfb3f7da4582893288f0ded8fe560"}, ] +[[package]] +name = "click" +version = "8.1.7" +description = "Composable command line interface toolkit" +optional = false +python-versions = ">=3.7" +files = [ + {file = "click-8.1.7-py3-none-any.whl", hash = "sha256:ae74fb96c20a0277a1d615f1e4d73c8414f5a98db8b799a7931d1582f3390c28"}, + {file = "click-8.1.7.tar.gz", hash = "sha256:ca9853ad459e787e2192211578cc907e7594e294c7ccc834310722b41b9ca6de"}, +] + +[package.dependencies] +colorama = {version = "*", markers = "platform_system == \"Windows\""} + [[package]] name = "colorama" version = "0.4.6" @@ -872,4 +886,4 @@ test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess [metadata] lock-version = "2.0" python-versions = "^3.12" -content-hash = "dd95973af37ddf9c78ba6c942ef7dab0acc4c54969d84d475d08208a24b69852" +content-hash = "3a623453cdd7da47c09dc08ae872e6168ef337c46b55f2ded23ac2ca6870b7c3" diff --git a/pyproject.toml b/pyproject.toml index d0f1472..cb673d9 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -21,6 +21,7 @@ classifiers = [ python = "^3.12" matplotlib = "^3.9" networkx = "^3.4" +click = "^8.1.7" [tool.poetry.dev-dependencies] pytest = "^8.3" From 658d0f90385d87ddd36cc62cf42547b9d654ea28 Mon Sep 17 00:00:00 2001 From: Christopher Carroll Smith Date: Tue, 15 Oct 2024 12:08:43 -0400 Subject: [PATCH 5/6] added arrows to the graph because directionality is super important in codebase dependency edges! --- codegraph/vizualyzer.py | 11 ++++++++--- 1 file changed, 8 insertions(+), 3 deletions(-) diff --git a/codegraph/vizualyzer.py b/codegraph/vizualyzer.py index 67e9184..8ae8e8f 100644 --- a/codegraph/vizualyzer.py +++ b/codegraph/vizualyzer.py @@ -75,13 +75,17 @@ def draw_graph(modules_entities: Dict) -> None: font_family="Arial", font_size=10, ) + + arrow_size = 15 + nx.draw_networkx_edges( G, pos, edgelist=module_edges_all, edge_color="#009c2c", width=2, - arrows=False, + arrows=True, + arrowsize=arrow_size, style="dashed", node_size=50, ) @@ -91,9 +95,10 @@ def draw_graph(modules_entities: Dict) -> None: edgelist=sub_edges_all, edge_color="r", width=2, - arrows=False, + arrows=True, + arrowsize=arrow_size, style="dashed", ) - for p in pos: # raise text positions + for p in pos: pos[p][1] += 0.07 plt.show() From 3f285c79a968796dd4e24d17a669ea226404f062 Mon Sep 17 00:00:00 2001 From: Christopher Carroll Smith Date: Thu, 17 Oct 2024 21:03:10 -0400 Subject: [PATCH 6/6] Fix namespace error --- codegraph/core.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/codegraph/core.py b/codegraph/core.py index 2f033ae..01d0365 100644 --- a/codegraph/core.py +++ b/codegraph/core.py @@ -36,7 +36,7 @@ def get_code_objects(paths_list: List) -> Dict: class CodeGraph: def __init__(self, args: Namespace): - self.paths_list = get_python_paths_list(args["paths"]) + self.paths_list = get_python_paths_list(args.paths) # get py modules list data self.modules_data = get_code_objects(self.paths_list)