non-transformed data

[alexZhongvai]

First of all, thanks for the wonderful package, with which I can convert flow data to pandas dataframe and makes my life a lot easier.

I just wonder how to extract non-transformed data when I use the following command to extract fj workspace that has transformation done? I plugged ignore_transformation =True in, but nothing happened.

import a FlowJo 10 workspace file

session.import_flowjo_workspace(wsp_path)

[whitews]

Hi Alex,

Sorry I missed this message. You can use the get_gate_membership method to retrieve a Boolean array that has True values for Sample events that are in the gate. With that Boolean array you can filter the Sample events (retrieved via the Sample get_events method).

Also, note that the upcoming 1.0 version will have breaking API changes for handling FlowJo workspace files. Basically there will be a dedicated Workspace class that will hopefully make things simpler for users.

Regards,
Scott

[alexZhongvai]

Thanks so much, Scott. I am looking forward to the new version!!