Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Error running Totalsegmentator #433

Open
AlvaroDan opened this issue Feb 24, 2025 · 0 comments
Open

Error running Totalsegmentator #433

AlvaroDan opened this issue Feb 24, 2025 · 0 comments

Comments

@AlvaroDan
Copy link

Hello, I've got an issue with module Total segmentator this week. I already have used it before and it worked.
Now I have this error. How could I solve it?

_Traceback (most recent call last):
File "C:\Users\PRUEBA\AppData\Local\NA-MIC\Slicer 5.2.2\bin\Python\slicer\util.py", line 2967, in tryWithErrorDisplay
yield
File "C:/Users/PRUEBA/AppData/Local/NA-MIC/Slicer 5.2.2/NA-MIC/Extensions-31382/TotalSegmentator/lib/Slicer-5.2/qt-scripted-modules/TotalSegmentator.py", line 271, in onApplyButton
self.logic.process(self.ui.inputVolumeSelector.currentNode(), self.ui.outputSegmentationSelector.currentNode(),
File "C:/Users/PRUEBA/AppData/Local/NA-MIC/Slicer 5.2.2/NA-MIC/Extensions-31382/TotalSegmentator/lib/Slicer-5.2/qt-scripted-modules/TotalSegmentator.py", line 859, in process
self.logProcessOutput(proc)
File "C:/Users/PRUEBA/AppData/Local/NA-MIC/Slicer 5.2.2/NA-MIC/Extensions-31382/TotalSegmentator/lib/Slicer-5.2/qt-scripted-modules/TotalSegmentator.py", line 697, in logProcessOutput
raise CalledProcessError(retcode, proc.args, output=proc.stdout, stderr=proc.stderr)
subprocess.CalledProcessError: Command '['C:/Users/PRUEBA/AppData/Local/NA-MIC/Slicer 5.2.2/bin/../bin\PythonSlicer.EXE', 'C:\Users\PRUEBA\AppData\Local\NA-MIC\Slicer 5.2.2\lib\Python\Scripts\TotalSegmentator', '-i', 'C:/Users/PRUEBA/AppData/Local/Temp/Slicer/__SlicerTemp__2025-02-24_16+36+00.226/total-segmentator-input.nii', '-o', 'C:/Users/PRUEBA/AppData/Local/Temp/Slicer/_SlicerTemp__2025-02-24_16+36+00.226/segmentation', '--ml', '--task', 'total', '--fast']' returned non-zero exit status 1.

I would appreciate your response,

ADCC.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant