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JuliaPerlBenchmark

A Basic Benchmark Comparison of Perl and Julia

#How To Run The Test To run the benchmark yourself, simply clone the github repo onto your computer, move into that directory, and type the following:

bash benchmark.sh

Benchmarking

Results suggest Perl is faster than Julia for processing fasta files (calculating median length).

#How To Get The Data Uncompress the files using this line

cat largeseqtest.fa.gz_* | gunzip -c > largeseqtest.fa

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A Basic Benchmark Comparison of Perl and Julia

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  • Perl 35.4%
  • Julia 30.0%
  • Shell 23.8%
  • R 10.8%