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"Upload submission form" element noted in doc does not exist #98

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vjcitn opened this issue Nov 6, 2024 · 1 comment
Open

"Upload submission form" element noted in doc does not exist #98

vjcitn opened this issue Nov 6, 2024 · 1 comment

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@vjcitn
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vjcitn commented Nov 6, 2024

To create a program, visit the URL where your Gen3 Commons is hosted and append `/_root`. If you are running the Docker Compose setup locally, then this will be `localhost/_root`. Otherwise, this will be whatever you set the `hostname` field to in the creds files for the services with `/_root` added to the end. Here, you can choose to either use form submission or upload a file. I will go through the process of using form submission here, as it will show you what your file would need to look like if you were using file upload. Choose form submission, search for "program" in the drop-down list and then fill in the "dbgap_accession_number" and "name" fields. As an example, you can use "123" as "dbgap accession number" and "Program1" as "name". Click 'Upload submission json from form' and then 'Submit'. If the message is green ("succeeded:200"), that indicates success, while a grey message indicates failure. More details can be viewed by clicking on the "DETAILS" button. If you don't see the green message, you can control the sheepdog logs for possible errors and check the Sheepdog database (`/datadictionary`), where programs and projects are stored. If you see your program in the data dictionary, neglect the fact that at this time the green message does not appear and continue to create a project.

uplcomp
@michaelfitzo
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michaelfitzo commented Nov 13, 2024

Can you clarify if the issue you are posting about is that the instructions mention clicking a button that says "Upload submission json from form", but the button in the portal actually reads "Upload file"? If this is not correct can you provide more details on the issue you are logging?

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