From c09bd72d4bef62d8ba2a408548ff6a7136f94a3a Mon Sep 17 00:00:00 2001
From: Chris <cgmeyer@uchicago.edu>
Date: Wed, 17 Jul 2024 11:45:35 -0500
Subject: [PATCH] fixing links in image_file and aligned_reads_file

---
 gdcdictionary/schemas/aligned_reads_file.yaml |  4 ++++
 gdcdictionary/schemas/image_file.yaml         | 16 ++++++++++++++++
 2 files changed, 20 insertions(+)

diff --git a/gdcdictionary/schemas/aligned_reads_file.yaml b/gdcdictionary/schemas/aligned_reads_file.yaml
index 1ba842d..1974d58 100644
--- a/gdcdictionary/schemas/aligned_reads_file.yaml
+++ b/gdcdictionary/schemas/aligned_reads_file.yaml
@@ -120,5 +120,9 @@ properties:
 
   read_groups:
     $ref: "_definitions.yaml#/to_many"
+
+  unaligned_reads_files:
+    $ref: "_definitions.yaml#/to_many"
+
   core_metadata_collections:
     $ref: "_definitions.yaml#/to_many"
diff --git a/gdcdictionary/schemas/image_file.yaml b/gdcdictionary/schemas/image_file.yaml
index 433430c..8ae51b5 100644
--- a/gdcdictionary/schemas/image_file.yaml
+++ b/gdcdictionary/schemas/image_file.yaml
@@ -30,6 +30,12 @@ links:
         target_type: core_metadata_collection
         multiplicity: many_to_one
         required: false
+      - name: datasets
+        backref: image_files
+        label: data_from
+        target_type: dataset
+        multiplicity: many_to_one
+        required: false
       - name: subjects
         backref: image_files
         label: data_from
@@ -49,6 +55,7 @@ links:
         multiplicity: many_to_one
         required: false
 
+
 uniqueKeys:
   - [id]
   - [project_id, submitter_id]
@@ -121,8 +128,17 @@ properties:
       The image file's data release Phase for a particular study.
     type: integer
 
+  datasets:
+    $ref: "_definitions.yaml#/to_one"
+
   subjects:
     $ref: "_definitions.yaml#/to_one"
 
+  imaging_studies:
+    $ref: "_definitions.yaml#/to_one"
+
+  imaging_series:
+    $ref: "_definitions.yaml#/to_one"
+
   core_metadata_collections:
     $ref: "_definitions.yaml#/to_one"