diff --git a/package-lock.json b/package-lock.json
index c6818f2..e44ddf6 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -29,6 +29,7 @@
"mantine-react-table": "^2.0.0-beta.7",
"react": "^18.2.0",
"react-dom": "18.2.0",
+ "sharp": "^0.33.5",
"swr": "^2.2.5"
},
"devDependencies": {
@@ -1575,6 +1576,16 @@
"postcss": "^8.4"
}
},
+ "node_modules/@emnapi/runtime": {
+ "version": "1.3.1",
+ "resolved": "https://registry.npmjs.org/@emnapi/runtime/-/runtime-1.3.1.tgz",
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+ "license": "MIT",
+ "optional": true,
+ "dependencies": {
+ "tslib": "^2.4.0"
+ }
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"node_modules/@emotion/is-prop-valid": {
"version": "0.8.8",
"resolved": "https://registry.npmjs.org/@emotion/is-prop-valid/-/is-prop-valid-0.8.8.tgz",
@@ -2241,6 +2252,367 @@
"url": "https://github.com/sponsors/antfu"
}
},
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+ "optional": true,
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+ "darwin"
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+ "x64"
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+ "license": "LGPL-3.0-or-later",
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+ "os": [
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+ "funding": {
+ "url": "https://opencollective.com/libvips"
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+ "resolved": "https://registry.npmjs.org/@img/sharp-libvips-linuxmusl-arm64/-/sharp-libvips-linuxmusl-arm64-1.0.4.tgz",
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+ "arm64"
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+ "license": "LGPL-3.0-or-later",
+ "optional": true,
+ "os": [
+ "linux"
+ ],
+ "funding": {
+ "url": "https://opencollective.com/libvips"
+ }
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+ "resolved": "https://registry.npmjs.org/@img/sharp-libvips-linuxmusl-x64/-/sharp-libvips-linuxmusl-x64-1.0.4.tgz",
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+ "cpu": [
+ "x64"
+ ],
+ "license": "LGPL-3.0-or-later",
+ "optional": true,
+ "os": [
+ "linux"
+ ],
+ "funding": {
+ "url": "https://opencollective.com/libvips"
+ }
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+ "funding": {
+ "url": "https://opencollective.com/libvips"
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+ "url": "https://opencollective.com/libvips"
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+ "node_modules/@img/sharp-wasm32": {
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+ "resolved": "https://registry.npmjs.org/@img/sharp-wasm32/-/sharp-wasm32-0.33.5.tgz",
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+ "cpu": [
+ "wasm32"
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+ "license": "Apache-2.0 AND LGPL-3.0-or-later AND MIT",
+ "optional": true,
+ "dependencies": {
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+ },
+ "engines": {
+ "node": "^18.17.0 || ^20.3.0 || >=21.0.0"
+ },
+ "funding": {
+ "url": "https://opencollective.com/libvips"
+ }
+ },
+ "node_modules/@img/sharp-win32-ia32": {
+ "version": "0.33.5",
+ "resolved": "https://registry.npmjs.org/@img/sharp-win32-ia32/-/sharp-win32-ia32-0.33.5.tgz",
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+ "cpu": [
+ "ia32"
+ ],
+ "license": "Apache-2.0 AND LGPL-3.0-or-later",
+ "optional": true,
+ "os": [
+ "win32"
+ ],
+ "engines": {
+ "node": "^18.17.0 || ^20.3.0 || >=21.0.0"
+ },
+ "funding": {
+ "url": "https://opencollective.com/libvips"
+ }
+ },
+ "node_modules/@img/sharp-win32-x64": {
+ "version": "0.33.5",
+ "resolved": "https://registry.npmjs.org/@img/sharp-win32-x64/-/sharp-win32-x64-0.33.5.tgz",
+ "integrity": "sha512-MpY/o8/8kj+EcnxwvrP4aTJSWw/aZ7JIGR4aBeZkZw5B7/Jn+tY9/VNwtcoGmdT7GfggGIU4kygOMSbYnOrAbg==",
+ "cpu": [
+ "x64"
+ ],
+ "license": "Apache-2.0 AND LGPL-3.0-or-later",
+ "optional": true,
+ "os": [
+ "win32"
+ ],
+ "engines": {
+ "node": "^18.17.0 || ^20.3.0 || >=21.0.0"
+ },
+ "funding": {
+ "url": "https://opencollective.com/libvips"
+ }
+ },
"node_modules/@isaacs/cliui": {
"version": "8.0.2",
"resolved": "https://registry.npmjs.org/@isaacs/cliui/-/cliui-8.0.2.tgz",
@@ -8071,6 +8443,19 @@
"dev": true,
"peer": true
},
+ "node_modules/color": {
+ "version": "4.2.3",
+ "resolved": "https://registry.npmjs.org/color/-/color-4.2.3.tgz",
+ "integrity": "sha512-1rXeuUUiGGrykh+CeBdu5Ie7OJwinCgQY0bc7GCRxy5xVHy+moaqkpL/jqQq0MtQOeYcrqEz4abc5f0KtU7W4A==",
+ "license": "MIT",
+ "dependencies": {
+ "color-convert": "^2.0.1",
+ "color-string": "^1.9.0"
+ },
+ "engines": {
+ "node": ">=12.5.0"
+ }
+ },
"node_modules/color-alpha": {
"version": "1.0.4",
"resolved": "https://registry.npmjs.org/color-alpha/-/color-alpha-1.0.4.tgz",
@@ -8148,6 +8533,16 @@
"mumath": "^3.3.4"
}
},
+ "node_modules/color-string": {
+ "version": "1.9.1",
+ "resolved": "https://registry.npmjs.org/color-string/-/color-string-1.9.1.tgz",
+ "integrity": "sha512-shrVawQFojnZv6xM40anx4CkoDP+fZsw/ZerEMsW/pyzsRbElpsL/DBVW7q3ExxwusdNXI3lXpuhEZkzs8p5Eg==",
+ "license": "MIT",
+ "dependencies": {
+ "color-name": "^1.0.0",
+ "simple-swizzle": "^0.2.2"
+ }
+ },
"node_modules/colorette": {
"version": "2.0.20",
"resolved": "https://registry.npmjs.org/colorette/-/colorette-2.0.20.tgz",
@@ -9009,6 +9404,15 @@
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"peer": true
},
+ "node_modules/detect-libc": {
+ "version": "2.0.3",
+ "resolved": "https://registry.npmjs.org/detect-libc/-/detect-libc-2.0.3.tgz",
+ "integrity": "sha512-bwy0MGW55bG41VqxxypOsdSdGqLwXPI/focwgTYCFMbdUiBAxLg9CFzG08sz2aqzknwiX7Hkl0bQENjg8iLByw==",
+ "license": "Apache-2.0",
+ "engines": {
+ "node": ">=8"
+ }
+ },
"node_modules/detect-newline": {
"version": "3.1.0",
"resolved": "https://registry.npmjs.org/detect-newline/-/detect-newline-3.1.0.tgz",
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"peer": true
},
+ "node_modules/sharp": {
+ "version": "0.33.5",
+ "resolved": "https://registry.npmjs.org/sharp/-/sharp-0.33.5.tgz",
+ "integrity": "sha512-haPVm1EkS9pgvHrQ/F3Xy+hgcuMV0Wm9vfIBSiwZ05k+xgb0PkBQpGsAA/oWdDobNaZTH5ppvHtzCFbnSEwHVw==",
+ "hasInstallScript": true,
+ "license": "Apache-2.0",
+ "dependencies": {
+ "color": "^4.2.3",
+ "detect-libc": "^2.0.3",
+ "semver": "^7.6.3"
+ },
+ "engines": {
+ "node": "^18.17.0 || ^20.3.0 || >=21.0.0"
+ },
+ "funding": {
+ "url": "https://opencollective.com/libvips"
+ },
+ "optionalDependencies": {
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+ "@img/sharp-darwin-x64": "0.33.5",
+ "@img/sharp-libvips-darwin-arm64": "1.0.4",
+ "@img/sharp-libvips-darwin-x64": "1.0.4",
+ "@img/sharp-libvips-linux-arm": "1.0.5",
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+ "@img/sharp-libvips-linux-s390x": "1.0.4",
+ "@img/sharp-libvips-linux-x64": "1.0.4",
+ "@img/sharp-libvips-linuxmusl-arm64": "1.0.4",
+ "@img/sharp-libvips-linuxmusl-x64": "1.0.4",
+ "@img/sharp-linux-arm": "0.33.5",
+ "@img/sharp-linux-arm64": "0.33.5",
+ "@img/sharp-linux-s390x": "0.33.5",
+ "@img/sharp-linux-x64": "0.33.5",
+ "@img/sharp-linuxmusl-arm64": "0.33.5",
+ "@img/sharp-linuxmusl-x64": "0.33.5",
+ "@img/sharp-wasm32": "0.33.5",
+ "@img/sharp-win32-ia32": "0.33.5",
+ "@img/sharp-win32-x64": "0.33.5"
+ }
+ },
+ "node_modules/sharp/node_modules/semver": {
+ "version": "7.6.3",
+ "resolved": "https://registry.npmjs.org/semver/-/semver-7.6.3.tgz",
+ "integrity": "sha512-oVekP1cKtI+CTDvHWYFUcMtsK/00wmAEfyqKfNdARm8u1wNVhSgaX7A8d4UuIlUI5e84iEwOhs7ZPYRmzU9U6A==",
+ "license": "ISC",
+ "bin": {
+ "semver": "bin/semver.js"
+ },
+ "engines": {
+ "node": ">=10"
+ }
+ },
"node_modules/shebang-command": {
"version": "2.0.0",
"resolved": "https://registry.npmjs.org/shebang-command/-/shebang-command-2.0.0.tgz",
@@ -23895,6 +24350,21 @@
"node": "*"
}
},
+ "node_modules/simple-swizzle": {
+ "version": "0.2.2",
+ "resolved": "https://registry.npmjs.org/simple-swizzle/-/simple-swizzle-0.2.2.tgz",
+ "integrity": "sha512-JA//kQgZtbuY83m+xT+tXJkmJncGMTFT+C+g2h2R9uxkYIrE2yy9sgmcLhCnw57/WSD+Eh3J97FPEDFnbXnDUg==",
+ "license": "MIT",
+ "dependencies": {
+ "is-arrayish": "^0.3.1"
+ }
+ },
+ "node_modules/simple-swizzle/node_modules/is-arrayish": {
+ "version": "0.3.2",
+ "resolved": "https://registry.npmjs.org/is-arrayish/-/is-arrayish-0.3.2.tgz",
+ "integrity": "sha512-eVRqCvVlZbuw3GrM63ovNSNAeA1K16kaR/LRY/92w0zxQ5/1YzwblUX652i4Xs9RwAGjW9d9y6X88t8OaAJfWQ==",
+ "license": "MIT"
+ },
"node_modules/sisteransi": {
"version": "1.0.5",
"resolved": "https://registry.npmjs.org/sisteransi/-/sisteransi-1.0.5.tgz",
diff --git a/package.json b/package.json
index 4bbe954..8c1b732 100644
--- a/package.json
+++ b/package.json
@@ -39,6 +39,7 @@
"mantine-react-table": "^2.0.0-beta.7",
"react": "^18.2.0",
"react-dom": "18.2.0",
+ "sharp": "^0.33.5",
"swr": "^2.2.5"
},
"devDependencies": {
diff --git a/src/lib/CohortBuilder/CustomCellRenderers.tsx b/src/lib/CohortBuilder/CustomCellRenderers.tsx
index c00ecd2..23018e6 100644
--- a/src/lib/CohortBuilder/CustomCellRenderers.tsx
+++ b/src/lib/CohortBuilder/CustomCellRenderers.tsx
@@ -1,12 +1,31 @@
+import React,{ ReactNode } from 'react';
import {
ExplorerTableCellRendererFactory,
type CellRendererFunctionProps,
} from '@gen3/frontend';
-import { ActionIcon } from '@mantine/core';
-import React from 'react';
+import { ActionIcon, Text } from '@mantine/core';
+
import { FaExternalLinkAlt } from 'react-icons/fa';
+const RenderLinkCell = (
+ { cell }: CellRendererFunctionProps,
+) => {
+ return (
+
+
+ {' '}
+ {cell.getValue() as ReactNode}{' '}
+
+
+ );
+};
+
+
const RenderDiacomLink = ({ cell }: CellRendererFunctionProps) => {
if (!cell.getValue() || cell.getValue() === '') {
return ;
@@ -25,4 +44,8 @@ export const registerCohortTableCustomCellRenderers = () => {
'link', 'DiacomLink' ,
RenderDiacomLink,
);
+ ExplorerTableCellRendererFactory().registerRenderer(
+ 'link', 'linkURL' ,
+ RenderLinkCell,
+ );
};
diff --git a/src/pages/_app.tsx b/src/pages/_app.tsx
index c1c5a5d..b608dcf 100644
--- a/src/pages/_app.tsx
+++ b/src/pages/_app.tsx
@@ -9,6 +9,8 @@ import {
RegisteredIcons,
Fonts,
SessionConfiguration,
+ registerCohortBuilderDefaultPreviewRenderers,
+ registerExplorerDefaultCellRenderers,
} from '@gen3/frontend';
import '../styles/globals.css';
import 'graphiql/graphiql.css';
@@ -19,6 +21,9 @@ import '@fontsource/poppins';
import {GEN3_COMMONS_NAME, setDRSHostnames} from '@gen3/core';
import drsHostnames from '../../config/drsHostnames.json';
+import { registerCohortTableCustomCellRenderers } from '@/lib/CohortBuilder/CustomCellRenderers';
+import { registerCustomExplorerDetailsPanels } from '@/lib/CohortBuilder/FileDetailsPanel';
+
import { initGrafanaFaro } from '../lib/Grafana/grafana';
if (typeof window !== 'undefined' && process.env.NODE_ENV !== 'production') {
@@ -58,6 +63,10 @@ const Gen3App = ({
// process.env.NEXT_PUBLIC_FARO_APP_ENVIRONMENT != "local" &&
// !faroRef.current
// ) {
+ registerExplorerDefaultCellRenderers();
+ registerCohortBuilderDefaultPreviewRenderers();
+ registerCohortTableCustomCellRenderers();
+ registerCustomExplorerDetailsPanels();
if (!faroRef.current) faroRef.current = initGrafanaFaro();
// }
}, []);