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DESCRIPTION
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Package: tRegs
Type: Package
Title: Signatures of TF regulatory activiy
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Version: 1.2
Date: 2017-04-07
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Version: 1.0
Date: 2017-03-16
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Author: Mehdi Fazel Najafabadi, Mario Medvedovic
Maintainer: Mehdi Fazel Najafabadi <[email protected]>
Description: The package provides tools for constructing gene-specific TF binding scores from ChIP-seq data (TREG binding scores) and for constructing TREG signatures of TF regulatory activity by integrating TREG binding scores with suitable matched differential gene expression profiles.
Depends:
R (>= 3.3.1),
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org.Hs.eg.db,
org.Mm.eg.db,
org.Rn.eg.db
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GenomicFeatures (>= 1.24.5),
org.Hs.eg.db,
org.Mm.eg.db,
org.Rn.eg.db
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License: GPL (>= 2)
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.0.1
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Packaged: 2017-04-07 09:05:15 UTC; Mehdi Fazel Najafabadi
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Packaged: 2017-03-16 10:18:15 UTC; Mehdi Fazel Najafabadi
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