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Reproduction issue in treeArches #244

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hansen7 opened this issue Jul 24, 2024 · 0 comments
Open

Reproduction issue in treeArches #244

hansen7 opened this issue Jul 24, 2024 · 0 comments

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@hansen7
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hansen7 commented Jul 24, 2024

Hi, I'm facing reproduction issue with treeArches in this notebook

While the data seems to be with the same shape,
image

The scVI's embeddings and the learned trees from scHPL is quite different from that in the toturial:
image

image

Do you have an idea on where the differences happen?

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