msdial error in opening waters (.raw) file AIF mode

[NISHATEWARI]

Can anyone please help me what is the issue with opening waters .raw file in opening in msdial. I converted the .raw file in abf and mzml format and tried to upload it in msdial but it is not showing any MS/MS deconvoluted spectra. Also msdial takes such a long time to open the file.

[rekarzan-rgb]

Hi, I’m experiencing the same problem; it works for DDA but not for DIA. Do we have any solution yet?

[NISHATEWARI]

I did not find any solution to this issue.

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On Mon, 24 Nov 2025, 15:01 rekarzan-rgb, ***@***.***> wrote: Hi, I’m experiencing the same problem; it works for DDA but not for DIA. Do we have any solution yet? — Reply to this email directly, view it on GitHub <#577 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/BCE5X7CYQCMWWOXLBSX4YN336LF7PAVCNFSM6AAAAAB626OI6OVHI2DSMVQWIX3LMV43URDJONRXK43TNFXW4Q3PNVWWK3TUHMYTKMBVHE3TONI> . You are receiving this because you are subscribed to this thread.Message ID: <systemsomicslab/MsdialWorkbench/repo-discussions/577/comments/15059775@ github.com>

[Bujee415]

Hello, there!
It is Bujee from the MS-DIAL team.
First of all, you don't need to convert .raw file. Just drag&drop it.
Is MS-DIAL still showing no MS/MS? Which version did you use for analysis? Can you send us some demo data so that we can reproduce the issue here?
Thank you!