CCPBioSim Leeds Training Workshop
Event Dates: From Thursday 10th to Friday 11th January 2019 Venue: The workshop will be held in the LIDA teaching clusters, Level 11, Worsley building, University of Leeds
Please fill in this feedback survey when you complete the workshop.
This is a basic workshop on biomolecular simulation aimed at beginners, but all levels of expertise are warmly welcome.
You can talk with each other and the trainers using the workshop etherpad. Please keep discussion respectful and remember the code of conduct.
- 10.30 - 11.00 : Welcome and introductions (plus logging onto the computers)
- 11.00 - 12.30 : Using VMD to visualise protein structures
- 12.30 - 13.30 : Lunch
- 13.30 - 15.00 : Setting up and Running Molecular Dynamics Simulations: Good Practice and Pitfalls
- 15.00 - 15.30 : Break
- 15.30 - 17.00 : Introduction to Jupyter Notebooks and Python
- 10.00 - 12.00 : Introduction to BioSimSpace
- 12.00 - 13.00 : Lunch
- 13.00 - 15.30 : Analysis of MD trajectories