pyproject.toml

[build-system]
requires = ["setuptools", "setuptools-scm", "wheel"]
build-backend = "setuptools.build_meta"

[project]
name = "blaze2"
dynamic = ["version"]
authors = [
    { name = "Yupei You", email = "youyupei@gmail.com" }
]
description = "Barcode identification from Long reads for AnalyZing single cell gene Expression"
readme = "README.md"
urls = { Source = "https://github.com/shimlab/BLAZE" }
license = { text = "GNU General Public License v3 (GPLv3)" }
requires-python = ">=3.7"
classifiers = [
    "Programming Language :: Python :: 3",
    "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
    "Operating System :: OS Independent",
]
dependencies = [
    "fast-edit-distance==1.2.2",
    "matplotlib",
    "tqdm",
    "numpy",
    "pandas",
]

[tool.setuptools]
packages = ["blaze"]  # You can also use find_packages if you have a specific package structure.

[tool.setuptools.package-data]
blaze = [
    "10X_bc/3M-february-2018.zip",
    "10X_bc/737K-august-2016.txt",
    "10X_bc/3M-5pgex-jan-2023.zip",
    "10X_bc/3M-3pgex-may-2023.zip"
]

[project.scripts]
blaze = "blaze:_pipeline"

[tool.setuptools_scm]