GLIBCXX_3.4.30 not being imported from miniconda enviroment

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Please make sure these conditions are met

• I have checked that this issue has not already been reported.
• I have confirmed this bug exists on the latest version of scanpy.
• (optional) I have confirmed this bug exists on the main branch of scanpy.

What happened?

I am trying to make scanpy work in reticulate. I used miniconda to create an enviroment. I can work with any regular package without problems, but scanpy and scvelo are having a similar issue.

when I try to import scanpy, I get:

ImportError: /cm/local/apps/gcc/current/lib64/libstdc++.so.6: version 'GLIBCXX_3.4.30' not found (required by /home/redacted/miniconda/miniconda/envs/r-reticulate/lib/python3.8/site-packages/scipy/optimize/_highs/_highs_wrapper.cpython-38-x86_64-linux-gnu.so)

My pyconfig looks like this:

python:         /home/redacted/miniconda/miniconda/envs/r-reticulate/bin/python
libpython:      /home/redacted/miniconda/miniconda/envs/r-reticulate/lib/libpython3.8.so
pythonhome:     /home/redacted/miniconda/miniconda/envs/r-reticulate:/home/redacted/miniconda/miniconda/envs/r-reticulate
version:        3.8.12 | packaged by conda-forge | (default, Sep 29 2021, 19:50:30)  [GCC 9.4.0]
numpy:          /home/redacted/miniconda/miniconda/envs/r-reticulate/lib/python3.8/site-packages/numpy
numpy_version:  1.21.6
builtins:       [builtin module]

NOTE: Python version was forced by use_python() function

scanpy is 1.9.6 and was installed from conda-forge.

"libstdc" is in my reticulate env:

$ ldd /home/redacted/miniconda/miniconda/envs/r-reticulate/lib/python3.8/site-packages/scipy/optimize/_highs/_highs_wrapper.cpython-38-x86_64-linux-gnu.so | grep libstdc++
        libstdc++.so.6 => /home/redacted/miniconda/miniconda/envs/r-reticulate/lib/python3.8/site-packages/scipy/optimize/_highs/../../../../../libstdc++.so.6 (0x00007ffff7e44000)

I don't know how to force it to use the correct path. Even if "GLIBCXX_3.4.30" can be found in /cm/local/apps/gcc/current/lib64/ it still does not work, so I have no idea how to work around this anymore.

Minimal code sample

{r}
library(reticulate)
Sys.setenv(RETICULATE_MINICONDA_PATH="/home/redacted/miniconda/miniconda")
conda_lib_path <- "/home/redacted/miniconda/miniconda/envs/r-reticulate/lib"
use_condaenv("r-reticulate", required = TRUE)


{python}
import scanpy

Error output

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