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ScientISST Notebooks

This table provides an overview of the complete set of notebooks made available in this repository.

Detailed Index:

Notebook Chapter Tags Contributors Last update
A001 Open Signals A Open Signals, Biosignals, Physiological Signals Acquisition Rafael Silva, Hugo Plácido da Silva, Ana Fred 16/05/2022
A002 Arduino Essentials A Arduino, Embedded Systems , Signals Acquisition Update authors dd/mm/aa
A003 Arduino - Getting started A Arduino, Embedded systems Update authors dd/mm/aa
A005 Seeeduino XIAO Essentials A Seeeduino XIAO, Embedded Systems , Signals Acquisition Update authors dd/mm/aa
A006 ScientISST - Arduino IDE tutorial A ScientISST, ScientISST CORE, Arduino IDE, Firmware Leonor Pereira; Ana Sofia Carmo; Francisco Melo; Afonso Raposo; Prof. Hugo Silva 11/22
A007 File Exploration A Hierarchical Data Format (HDF), Data Loading, Metadata Update authors dd/mm/aa
A008 Setup your Python workspace A Programming, Python, Anaconda, Data Visualization, Data Structures Rafael Silva, Hugo Plácido da Silva and Ana Fred 12/05/2022
A009 Essentials of Post-processing A Low-Pass Filter, Python, Plotting Update authors dd/mm/aa
A010 Python File Handling and Visualization A Python, File Handling, Data Visualization Rafael Silva, Hugo Plácido da Silva and Ana Fred 22/05/2022
A011 How to flash a ScientISST board with the official firmware A ScientISST, firmware, configuration Rui Maciel, Frederico Almeida Santos 05/03/2023
B001 Basic active circuits with an OpAmp B Operational Amplifiers, Circuit Analysis, Arduino Afonso Raposo, Joana Pinto, Prof. João Sanches; Prof. Hugo Silva 2021
B002 Frequency response B Electronic components, Instrumentation, Passive Circuits Update authors dd/mm/aa
B003 Introduction to the Laboratory Equipment B Electronics, Equipment, Instrumentation, Arduino, Arduino IDE, Seeeduino Nano Ana Sofia Carmo, Afonso Raposo, Prof. Hugo Silva 09/2022
B004 Digital to Analog Converter - DAC B Digital to Analog Conversion (DAC), Digital Signal Processing (DSP), Arduino Afonso Raposo, Joana Pinto, Prof. Hugo Silva 2021
B005 Analog-to-Digital Conversion (ADC) B Analog to Digital Conversion (ADC), Digital Signal Processing (DSP), Embedded Systems Ana Sofia Carmo; Afonso Raposo; Joana Pinto; Prof. Hugo Silva 09/2022
B006 Digital to Analog Converter B Digital to Analog Converter (DAC), Digital Signal Processing (DSP), Arduino Update authors dd/mm/aa
B007 Basic Circuit Analysis B RC Circuits, Circuit Analysis, Arduino Afonso Raposo, Joana Pinto, Prof. João Sanches; Prof. Hugo Silva 2021
B008 Analog Signals B Analog-to-Digital Conversion (ADC), Digital-to-Analog Conversion (DAC), Elementary Feedback, Embedded Systems Update authors dd/mm/aa
B009 Data Transmission B Digital Systems, Data Streaming, Embedded Systems Update authors dd/mm/aa
B010 Sampling B Time Sampling, Real-Time Acquisition Systems, Embedded Systems Update authors dd/mm/aa
B011 Working with Arduino and Digital Interfaces B Arduino, Embedded Systems , Digital Read, Serial Communication Ana Sofia Carmo, Afonso Raposo, Joana Pinto, Prof. Hugo Silva 09/2022
C001 Science Journal C Experimental Journal, Mobile Devices, Data Acquisition Update authors dd/mm/aa
C002 OpenSignals for Annotations C Open Signals, HDF5 Files, Annotations Update authors dd/mm/aa
C003 ESP32 Firebase Connection C Internet of Things, Microcontrollers, Google Firebase Update authors dd/mm/aa
C004 Live Streaming and Signal Processing C Serial Port, Python, Live Streaming, Signal Processing Afonso Raposo, Joana Pinto, Prof. Hugo Silva 2021
C005 Basic Primer on APIs C Application Programming Interfaces (APIs), Python, BITalino Update authors dd/mm/aa
C006 Real-time Analytics C Electromyography (EMG), Python, Biofeedback System Update authors dd/mm/aa
C007 Principles of Biosignal Acquisition C Biosignal Acquisition, SENSE, SENSE API, Data Visualization Rafael Silva, Hugo Plácido da Silva, Ana Fred 16/05/2022
D001 IIR Adaptive Filtering D Body Temperature, Thermometer, Adaptive filters,IIR filters Update authors dd/mm/aa
D002 Kalman D Kalman filter, Python, Signal Processing, Low-pass Filters Update authors dd/mm/aa
D003 Signal Conversion D ADC, Signal conversion Update authors dd/mm/aa
D004 ECG Synthesizer D Electrocardiogram, ECG, ECG synthesizer Update authors dd/mm/aa
D005 Frequency Analysis D Frequency Analysis, FFT, Filter, BioSPPy Rafael Silva, Hugo Plácido da Silva and Ana Fred 30/05/2022
E001 From Python to the World E Web Sockets (WS), Data Reception, Data Transmission,Client-server architecture Update authors dd/mm/aa
E002 Interchanging Structured Data E JavaScript Object Notation (JSON), Structure Data, Metadata, HTML,CSS,JS Update authors dd/mm/aa
E003 Into the World Wild Web E HyperText Markup Language (HTML), Web Page Structuring, Metadata, HTML/CSS/JS Update authors dd/mm/aa
E004 Jazzing Up Your UIs E Cascading Style Sheets (CSS), Web Page Formatting Update authors dd/mm/aa
E005 How to Tame Your Pages E JavaScript (JS), Web Page Dynamic Interactions Update authors dd/mm/aa
F001 Working with Features F Electrocardiography (ECG), Python, Poincare Plot, Heart Rate Variability Update authors dd/mm/aa
F002 Signal Classification Using SL F Supervised Learning, Biosignals,Signal Classification Update authors dd/mm/aa
F003 Classification of Human Activity Data F Supervised Learning,Unsupervised Learning, Accelerometry Data Update authors dd/mm/aa
F004 Clustering of Human Activity Data F Clustering, Unsupervised Learning, Accelerometry Data Mariana Abreu, Patrícia Bota, Ana Fred 2021
F005 Biosignal Feature Extraction F ECG, BioSSPy, Feature Extraction, HRV Rafael Silva, Hugo Plácido da Silva and Ana Fred 13/06/2022
F006 Introduction to Classification F Classification, ML, Scikit Learn, HRV Rafael Silva, Hugo Plácido da Silva and Ana Fred 18/06/2022
G001 Continuous Body Temperature Measurement using an IR Senso G Body Temperature, Thermometer, Kalman filter,IIR filters Update authors dd/mm/aa
G002 PPG from Smartphone Camera G Photoplethysmogram (PPG), Smartphone, Camera Update authors dd/mm/aa
G003 Autoencoders Respiration G Autoencoders, Neural Networks, Supervised Learning, Apnea Detection Update authors dd/mm/aa
G004 Swimming G IMU data, Data filtering, Data segmentation, Feature Extraction Update authors dd/mm/aa