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Check out-of-bound memory access, adds to b29c54cbe29c06f91ef1ad16921… #16

Check out-of-bound memory access, adds to b29c54cbe29c06f91ef1ad16921…

Check out-of-bound memory access, adds to b29c54cbe29c06f91ef1ad16921… #16

Workflow file for this run

name: Windows/MinGW-W64 CI
on: [push, pull_request]
jobs:
build:
runs-on: windows-latest
steps:
- name: Checkout
uses: actions/checkout@v4
with:
ref: ${{ github.event.pull_request.head.sha }}
- name: Set up MSYS2 MinGW-W64
uses: msys2/setup-msys2@v2
with:
msystem: mingw64
update: false
install: >-
mingw-w64-x86_64-toolchain
mingw-w64-x86_64-autotools
mingw-w64-x86_64-curl
mingw-w64-x86_64-libdeflate
mingw-w64-x86_64-tools-git
mingw-w64-x86_64-zlib
mingw-w64-x86_64-bzip2
mingw-w64-x86_64-xz
- name: Clone htslib
shell: msys2 {0}
run: |
export PATH="$PATH:/mingw64/bin:/c/Program Files/Git/bin"
export MSYSTEM=MINGW64
htslib_pr=`git log -2 --format='%s' | sed -n 's/.*htslib#\([0-9]*\).*/\1/p'`
.ci_helpers/clone ${GITHUB_REPOSITORY_OWNER} htslib htslib ${GITHUB_HEAD_REF:-$GITHUB_REF_NAME} $htslib_pr
pushd .
cd htslib
autoreconf -i
popd
- name: Compile bcftools
shell: msys2 {0}
run: |
export PATH="$PATH:/mingw64/bin:/c/Program Files/Git/bin"
export MSYSTEM=MINGW64
autoheader
autoconf -Wno-syntax
./configure --enable-werror
make -j4
- name: Check bcftools
shell: msys2 {0}
run: |
export PATH="$PATH:/mingw64/bin:/c/Program Files/Git/bin"
export MSYSTEM=MINGW64
make check