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make optimizer backend switchable #8

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russelljjarvis opened this issue Nov 18, 2021 · 0 comments
Open

make optimizer backend switchable #8

russelljjarvis opened this issue Nov 18, 2021 · 0 comments
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enhancement New feature or request help wanted Extra attention is needed

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@russelljjarvis
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russelljjarvis commented Nov 18, 2021

Through Julia batch scripts two packages for bio-inspired algorithms have been found to be effective, in single cell and network optimizations. Those are 1. Evolutionary.jl, 2. Metahieristics.jl. Both of these two packages have different APIs and different expected inputs and outputs. It is not extensively known if one performs more efficient optimization than the other.

Both of these bio-inspired algorithm packages should be wrapped with a higher-level API, such that either backend can be easily switched between, in order to explore which is the most effective optimization package (or perhaps neither is significantly better than the other).

make optimizer backend switchable between Evolutionary.jl and Metahieristics.jl

Example call Evolutionary API:
https://github.com/russelljjarvis/SpikeNetOpt.jl/blob/main/examples/evolutionary_based_opt.jl#L226-L250

Example call MetaHieristics API
https://github.com/russelljjarvis/SpikeNetOpt.jl/blob/main/run_net_opt.jl#L117-L131

@russelljjarvis russelljjarvis added enhancement New feature or request help wanted Extra attention is needed labels Nov 23, 2021
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