Hello!
Just a note that links generated by the report for "reads" and "kraken_report" on windows machines contain the "wsl" /mnt/c path so don't work in the report. The "assemblies" link does work though.
For the ones that don't work:
file:///C:/mnt/c/Users/ARTIC/epi2melabs/instances/wf-metagenomics_01HB7EKYD5DA7SEKGB2X7M7X19/output/kraken/barcode01.kreport.txt
Should be:
file:///C:/Users/ARTIC/epi2melabs/instances/wf-metagenomics_01HB7EKYD5DA7SEKGB2X7M7X19/output/kraken/barcode01.kreport.txt
Hello!
Just a note that links generated by the report for "reads" and "kraken_report" on windows machines contain the "wsl"
/mnt/cpath so don't work in the report. The "assemblies" link does work though.For the ones that don't work:
file:///C:/mnt/c/Users/ARTIC/epi2melabs/instances/wf-metagenomics_01HB7EKYD5DA7SEKGB2X7M7X19/output/kraken/barcode01.kreport.txtShould be:
file:///C:/Users/ARTIC/epi2melabs/instances/wf-metagenomics_01HB7EKYD5DA7SEKGB2X7M7X19/output/kraken/barcode01.kreport.txt