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Description
After writing, the PoseEstimation.devices field shows up as None when linked to a CameraDevice from ndx_franklab_novela. See minimal example below.
from pynwb.testing.mock.file import mock_NWBFile
from pynwb import NWBHDF5IO
from ndx_pose import PoseEstimation
from ndx_franklab_novela import CameraDevice
def main():
nwbfile = mock_NWBFile()
camera_device = CameraDevice(
name="Device",
meters_per_pixel=1.0,
model="model",
lens="lens",
camera_name="camera_name",
)
nwbfile.add_device(camera_device)
device = nwbfile.devices["Device"]
pose_estimation = PoseEstimation(
name="PoseEstimation",
devices=[device],
)
nwbfile.create_processing_module(
name="behavior",
description="behavior",
)
nwbfile.processing["behavior"].add(pose_estimation)
print(nwbfile.processing["behavior"].data_interfaces["PoseEstimation"].devices)
# [Device abc.CameraDevice at 0x4685396304
# Fields:
# camera_name: camera_name
# lens: lens
# meters_per_pixel: 1.0
# model: model
# ]
with NWBHDF5IO("test.nwb", "w") as io:
io.write(nwbfile)
with NWBHDF5IO("test.nwb", "r") as io:
nwbfile = io.read()
print(nwbfile.processing["behavior"].data_interfaces["PoseEstimation"].devices) # None
if __name__ == "__main__":
main()Reactions are currently unavailable
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