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Sherlock

CentOS Linux release 7.6.1810 (Core) Linux sh03-ln07.stanford.edu 3.10.0-957.27.2.el7.x86_64 #1 SMP Mon Jul 29 17:46:05 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux

gnu_openmpi

module

module load openblas/0.3.10 gcc/10.1.0 openmpi/4.0.3 cmake eigen/3.3.3 metis/5.1.0 libxml2/2.9.4

Module version of gmp does not have c++ bindings

boost

Available versions are too old or buggy. wget https://dl.bintray.com/boostorg/release/1.74.0/source/boost_1_74_0.tar.bz2 tar -jxf boost_1_74_0.tar.bz2 cd boost_1_74_0 ./bootstrap.sh –prefix=$HOME/gnu_openmpi/install –without-libraries=python ./b2 –prefix=$HOME/gnu_openmpi/install -j 64 ./b2 –prefix=$HOME/gnu_openmpi/install install

gmp

./configure –enable-cxx –prefix=$HOME/gnu_openmpi/install

mpfr

wget https://www.mpfr.org/mpfr-current/mpfr-4.1.0.tar.bz2 ./configure –with-gmp=$HOME/gnu_openmpi/install –prefix=$HOME/gnu_openmpi/install

Elemental

git clone https://gitlab.com/bootstrapcollaboration/elemental.git cmake .. -DCMAKE_CXX_COMPILER=mpicxx -DCMAKE_C_COMPILER=mpicc -DCMAKE_Fortran_COMPILER=mpif90 -DCMAKE_INSTALL_PREFIX=$HOME/gnu_openmpi/install -DMETIS_INCLUDE_DIR=/share/software/user/open/metis/5.1.0/include -DMETIS_LIBRARY=/share/software/user/open/metis/5.1.0/lib/libmetis.so

make -j 4

RapidJSON

git clone https://github.com/Tencent/rapidjson.git cmake .. -DCMAKE_CXX_COMPILER=mpicxx -DCMAKE_INSTALL_PREFIX=$HOME/gnu_openmpi/install

libxml2

development libraries not installed =:O !!! wget ftp://xmlsoft.org/libxml2/libxml2-2.9.10.tar.gz

libarchive

wget http://www.libarchive.org/downloads/libarchive-3.5.1.tar.xz ./configure –prefix=$HOME/gnu_openmpi/install make -j 16 make install

sdpb

git clone https://github.com/davidsd/sdpb CXX=mpicxx ./waf configure –prefix=$HOME/gnu_openmpi/install –elemental-dir=$HOME/gnu_openmpi/install –rapidjson-dir=$HOME/gnu_openmpi/install –boost-dir=$HOME/gnu_openmpi/install –gmpxx-dir=$HOME/gnu_openmpi/install –mpfr-dir=$HOME/gnu_openmpi/install –libarchive-dir=$HOME/gnu_openmpi/install

./waf -j 4

Trilinos

git clone –branch trilinos-release-12-12-branch https://github.com/trilinos/Trilinos.git cmake -DCMAKE_CXX_COMPILER=g++ -DCMAKE_C_COMPILER=gcc -DCMAKE_Fortran_COMPILER=gfortran -DTrilinos_ENABLE_Sacado=ON -DTrilinos_ENABLE_Kokkos=OFF -DTrilinos_ENABLE_Teuchos=OFF -DCMAKE_INSTALL_PREFIX=$HOME/gnu_openmpi/install ..

scalar_blocks

git clone https://gitlab.com/bootstrapcollaboration/scalar_blocks.git ./waf configure –boost-dir=$HOME/gnu_openmpi/install –gmp-dir=$HOME/gnu_openmpi/install –trilinos-dir=$HOME/gnu_openmpi/install –eigen-incdir=/user/open/eigen/3.3.3/include/eigen3 –prefix=$HOME/gnu_openmpi/install

fmt

wget https://github.com/fmtlib/fmt/releases/download/6.2.1/fmt-6.2.1.zip cmake -DCMAKE_CXX_COMPILER=g++ -DCMAKE_INSTALL_PREFIX=$HOME/gnu_openmpi/install ..

blocks_3d

git clone https://gitlab.com/bootstrapcollaboration/blocks_3d.git ./waf configure –prefix=$HOME/gnu_openmpi/install –fmt-dir=$HOME/gnu_openmpi/install –fmt-libdir=$HOME/gnu_openmpi/install/lib64 –boost-dir=$HOME/gnu_openmpi/install –eigen-incdir=/user/open/eigen/3.3.3/include/eigen3 –gmp-dir=$HOME/gnu_openmpi/install

Batch Scripts

/home/wlandry/arcus_c/runs/TTTT_small.sh /home/wlandry/arcus_c/runs/scalar_blocks.sh /home/wlandry/arcus_c/runs/blocks_3d.sh