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run.py
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run.py
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"""Load model, data and corresponding configs. Trigger training."""
import os
import pathlib
import sys
import numpy as np
import torch
import torch.multiprocessing as mp
import wandb
from baselines.sklearn_tune import run_sklearn_hypertuning
from npt.column_encoding_dataset import ColumnEncodingDataset
from npt.configs import build_parser
from npt.distribution import distributed_train_wrapper
from npt.train import Trainer
from npt.utils.model_init_utils import init_model_opt_scaler_from_dataset
from npt.utils.viz_att_maps import viz_att_maps
def main(args):
"""Load model, data, configs, start training."""
args, wandb_args = setup_args(args)
run_cv(args=args, wandb_args=wandb_args)
def setup_args(args):
print('Configuring arguments...')
if args.exp_azure_sweep:
print('Removing old logs.')
os.system('rm -r wandb')
if args.np_seed == -1:
args.np_seed = np.random.randint(0, 1000)
if args.torch_seed == -1:
args.torch_seed = np.random.randint(0, 1000)
if args.exp_name is None:
args.exp_name = f'{wandb.util.generate_id()}'
if (args.exp_group is None) and (args.exp_n_runs > 1):
# Assuming you want to do CV, group runs together.
args.exp_group = f'{wandb.util.generate_id()}'
print(f"Doing k-FOLD CV. Assigning group name {args.exp_group}.")
if args.exp_azure_sweep:
print("Azure sweep run!")
# Our configs may run oom. That's okay.
os.environ['WANDB_AGENT_DISABLE_FLAPPING'] = 'true'
if not isinstance(args.model_augmentation_bert_mask_prob, dict):
print('Reading dict for model_augmentation_bert_mask_prob.')
# Well, this is ugly. But I blame it on argparse.
# There is just no good way to parse dicts as arguments.
# Good thing, I don't care about code security.
exec(
f'args.model_augmentation_bert_mask_prob = '
f'{args.model_augmentation_bert_mask_prob}')
if not isinstance(args.model_label_bert_mask_prob, dict):
print('Reading dict for model_augmentation_bert_mask_prob.')
exec(
f'args.model_label_bert_mask_prob = '
f'{args.model_label_bert_mask_prob}')
if not args.model_bert_augmentation:
for value in args.model_augmentation_bert_mask_prob.values():
assert value == 0
for value in args.model_label_bert_mask_prob.values():
assert value == 1
if (args.model_class == 'sklearn-baselines' and
args.sklearn_model == 'TabNet' and not args.data_force_reload):
raise ValueError('For TabNet, user must specify data_force_reload '
'to encode data in a TabNet-compatible manner.')
pathlib.Path(args.wandb_dir).mkdir(parents=True, exist_ok=True)
# Set seeds
np.random.seed(args.np_seed)
# Resolve CUDA device(s)
if args.exp_use_cuda and torch.cuda.is_available():
if args.exp_device is not None:
print(f'Running model with CUDA on device {args.exp_device}.')
exp_device = args.exp_device
else:
print(f'Running model with CUDA')
exp_device = 'cuda:0'
else:
print('Running model on CPU.')
exp_device = 'cpu'
args.exp_device = exp_device
wandb_args = dict(
project=args.project,
entity=args.entity,
dir=args.wandb_dir,
reinit=True,
name=args.exp_name,
group=args.exp_group)
return args, wandb_args
def run_cv(args, wandb_args):
if args.mp_distributed:
wandb_run = None
c = args
else:
wandb_run = wandb.init(**wandb_args)
args.cv_index = 0
wandb.config.update(args, allow_val_change=True)
c = wandb.config
if c.model_class == 'NPT':
run_cv_splits(wandb_args, args, c, wandb_run)
elif c.model_class == 'sklearn-baselines':
run_sklearn_hypertuning(
ColumnEncodingDataset(c), wandb_args, args, c, wandb_run)
def run_cv_splits(wandb_args, args, c, wandb_run):
dataset = ColumnEncodingDataset(c)
#######################################################################
# Distributed Setting
if c.mp_distributed:
torch.manual_seed(c.torch_seed)
# Fix from
# https://github.com/facebookresearch/maskrcnn-benchmark/issues/103
# torch.multiprocessing.set_sharing_strategy('file_system')
dataset.load_next_cv_split()
dataset.dataset_gen = None
args = {'dataset': dataset, 'c': c, 'wandb_args': wandb_args}
os.environ['MASTER_ADDR'] = 'localhost'
os.environ['MASTER_PORT'] = '8888'
mp.spawn(
distributed_train_wrapper, nprocs=c.mp_gpus, args=(args,),
join=True)
mp.set_start_method('fork')
return
starting_cv_index = 0
total_n_cv_splits = min(dataset.n_cv_splits, c.exp_n_runs)
# Since we're doing CV by default, model init is in a loop.
for cv_index in range(starting_cv_index, total_n_cv_splits):
print(f'CV Index: {cv_index}')
print(f'Train-test Split {cv_index + 1}/{dataset.n_cv_splits}')
if c.exp_n_runs < dataset.n_cv_splits:
print(
f'c.exp_n_runs = {c.exp_n_runs}. '
f'Stopping at {c.exp_n_runs} splits.')
# New wandb logger for each run
if cv_index > 0:
wandb_args['name'] = f'{wandb.util.generate_id()}'
args.exp_name = wandb_args['name']
args.cv_index = cv_index
wandb_run = wandb.init(**wandb_args)
wandb.config.update(args, allow_val_change=True)
#######################################################################
# Load New CV Split
dataset.load_next_cv_split()
if c.viz_att_maps:
print('Attempting to visualize attention maps.')
return viz_att_maps(c, dataset)
if c.model_class == 'DKL':
print(f'Running DKL on dataset {c.data_set}.')
from baselines.models.dkl_run import main
return main(c, dataset)
#######################################################################
# Initialise Model
model, optimizer, scaler = init_model_opt_scaler_from_dataset(
dataset=dataset, c=c, device=c.exp_device)
# if not c.exp_azure_sweep:
# wandb.watch(model, log="all", log_freq=10)
#######################################################################
# Run training
trainer = Trainer(
model=model, optimizer=optimizer, scaler=scaler,
c=c, wandb_run=wandb_run, cv_index=cv_index, dataset=dataset)
trainer.train_and_eval()
wandb_run.finish()
if __name__ == '__main__':
parser = build_parser()
args = parser.parse_args()
main(args)