diff --git a/harpy/bin/molecule_coverage.py b/harpy/bin/molecule_coverage.py index 511c2e36..b97a6883 100755 --- a/harpy/bin/molecule_coverage.py +++ b/harpy/bin/molecule_coverage.py @@ -69,7 +69,7 @@ def which_overlap(start: int, end: int, binlist: list): def print_depth_counts(contig, counter_obj, intervals): """Print the Counter object to stdout""" for idx,int_bin in enumerate(intervals): - sys.stdout.write(f"{contig}\t{int_bin.start}\t{int_bin.stop}\t{counter_obj[idx]/(int_bin.end - int_bin.start)}\n") + sys.stdout.write(f"{contig}\t{int_bin.start}\t{int_bin.stop}\t{counter_obj[idx]/(int_bin.stop - int_bin.start)}\n") with gzip.open(args.statsfile, "rt") as statsfile: aln_ranges = []