Repositories list

• pmartR

  Public
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of mass spectrometry (MS) omics data, in particular proteomic (either at the peptide or the protein level), lipidomic, and metabolomic data.

  proteinsmass-spectrometryrna-seq-analysis+ 5peptidesmetabolitesmetabolomics-datadata-summarizationlipids

  R

  •

  Other

  •16•38•6•1•Updated Dec 16, 2024Dec 16, 2024

• PMart_ShinyApp

  Public
  Shiny GUI implementation of pmartR

  R

  •

  BSD 2-Clause "Simplified" License

  •1•3•0•0•Updated Dec 16, 2024Dec 16, 2024

• MODE_ShinyApp

  Public
  A shiny web application for visualizing omics data with trelliscope displays

  R

  •

  BSD 2-Clause "Simplified" License

  •0•1•0•0•Updated Nov 21, 2024Nov 21, 2024

• FIRM-AVP

  Public
  R

  •1•2•0•0•Updated Oct 14, 2024Oct 14, 2024

• malbacR

  Public
  R

  •

  BSD 2-Clause "Simplified" License

  •1•5•0•0•Updated Aug 2, 2024Aug 2, 2024

• soil_lipid_atlas

  Public
  0•0•0•0•Updated Apr 26, 2024Apr 26, 2024

• drat

  Public
  drat repository for pmartR-related packages

  94•0•0•0•Updated Nov 9, 2023Nov 9, 2023

• pmartRdata

  Public
  R

  •6•5•1•1•Updated Oct 10, 2023Oct 10, 2023

• qcrlsc

  Public
  Quality Control-based Robust LOESS Signal Correction

  R

  •0•5•0•0•Updated Feb 17, 2021Feb 17, 2021

• peppuR

  Public
  R

  •

  BSD 2-Clause "Simplified" License

  •0•2•1•0•Updated Jan 13, 2020Jan 13, 2020

• mead

  Public
  Metagenomics exploratory and analysis dashboard

  JavaScript

  •

  MIT License

  •0•1•12•0•Updated Sep 13, 2018Sep 13, 2018

• pmartRseq

  Public
  R

  •

  BSD 2-Clause "Simplified" License

  •1•1•1•0•Updated Jul 27, 2018Jul 27, 2018

• pmartRmems

  Public
  HTML

  •

  BSD 2-Clause "Simplified" License

  •2•0•0•0•Updated Aug 11, 2017Aug 11, 2017