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@TESTgroup-BNL Terrestrial Ecosystem Science and Technology (TEST) Group (Active Archive)

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    28 repositories

    • MoDaCS

      Public
      Modular Data Collection System
      uavdronestructure-from-motionuasremote-sensingspectraspectroscopythermalreflectanceunmanned-air-vehicle
      Python
      •
      GNU General Public License v3.0
      •2•1•12•0•Updated Aug 9, 2024Aug 9, 2024

    • LeafGasExchange

      Public
      An R package for fitting and simulating leaf level gas exchange
      R
      •
      GNU General Public License v3.0
      •1•6•7•0•Updated May 17, 2024May 17, 2024

    • CSVQA

      Public
      Tools for QA checks, fixes and post-processing for CSV files
      Python
      •
      GNU General Public License v3.0
      •1•0•5•0•Updated Jan 31, 2024Jan 31, 2024

    • FCP

      Public
      FACE Control Program
      Pascal
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 30, 2024Jan 30, 2024

    • PiCam

      Public
      The PiCam time-lapse camera system. A nRF52840 managed, low power sensor node and Raspberry Pi camera system designed for autonomous operations in remote regions for the collection of vegetation phenology data
      raspberry-pirtimeseriescameravegetationplantarcticecologytimelapsephenology
      HTML
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Sep 20, 2023Sep 20, 2023

    • NGSapFlux_r

      Public
      An R package for working with and processing sap flux generated using the BNL TEST group NGSapFlux sensor package
      R
      •
      GNU General Public License v3.0
      •0•0•6•0•Updated Sep 18, 2023Sep 18, 2023

    • Lamour_et_al_2021_Letter_on_Marquez_et_al_2021_paper

      Public
      Implementation of Marquez et al. 2021 new gas exchange theory
      R
      •0•0•0•0•Updated Jul 11, 2023Jul 11, 2023

    • ngeearctic_elm_containers

      Public
      E3SM Land Model (ELM) containers for NGEE-Arctic
      Jupyter Notebook
      •
      MIT License
      •9•0•0•0•Updated Jun 14, 2023Jun 14, 2023

    • NGSapFlux

      Public
      Next-generation Sap Flux. Repository for storing schematics, code, and other information related to the development of custom sap flux sensors
      C
      •
      GNU General Public License v3.0
      •0•0•7•0•Updated Apr 14, 2023Apr 14, 2023

    • JSONFileField

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 12, 2023Apr 12, 2023

    • pca10059_PiCam

      Public
      C++
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 5, 2023Apr 5, 2023

    • nvbbcc

      Public
      Initial location for developing workflow code for the NVBBCC effort. This location is expected to migrate to a NVBBCC organization at some point
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 17, 2023Mar 17, 2023

    • example_gee_uas_scripts

      Public
      Small repository of example Google Earth Engine Jupyter Notebooks
      Jupyter Notebook
      •
      MIT License
      •1•0•2•0•Updated Jun 28, 2022Jun 28, 2022

    • meeting_demos

      Public
      Repository for examples used in meetings or presentations
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 11, 2022Apr 11, 2022

    • hytools_helpers

      Public
      A set of examples and scripts to help with using EnSpec_hytools
      Python
      •
      MIT License
      •1•1•1•0•Updated Mar 21, 2022Mar 21, 2022

    • canopyRT

      Public
      A sandbox for exploring leaf/canopy RT representations in LSMs
      R
      •
      MIT License
      •1•0•1•0•Updated Jan 14, 2022Jan 14, 2022

    • gee_examples

      Public
      A small repo containing GEE, rgee, and Python GEE examples
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Oct 5, 2021Oct 5, 2021

    • exploringCOGs

      Public
      A sandbox of scripts and data to explore the use of cloud-optimized geotiff datasets to facilitate direct data ingest into analysis workflows
      Jupyter Notebook
      •
      MIT License
      •1•1•0•0•Updated Jul 12, 2021Jul 12, 2021

    • Rogers_etal_NGEEArctic_LightResponse

      Public archive
      Repository containing LiCor photosynthetic light response curve data, R scripts for fitting the data, and our script for calculating leaf absorptance from measured reflectance
      R
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Dec 16, 2020Dec 16, 2020

    • Viskari_etal_ED2_radiation_uncertainty

      Public archive
      The influence of canopy radiation parameter uncertainty on model projections of terrestrial carbon and energy cycling
      Roff
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Dec 16, 2020Dec 16, 2020

    • Matlab-Canopy_Photosynthesis

      Public archive
      Testbed for canopy scaling and modeling of Photosynthesis and GPP
      MATLAB
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Dec 16, 2020Dec 16, 2020

    • R-Canopy_Photosynthesis

      Public
      Testbed for canopy scaling and modeling of Photosynthesis and GPP
      R
      •
      GNU General Public License v3.0
      •1•4•0•0•Updated Nov 9, 2020Nov 9, 2020

    • Ely_etal_2019_JournalOfExperimentalBotany

      Public
      Leaf-level Spectra-trait PLSR models to estimate key leaf traits associated with source–sink balance and carbon–nitrogen status using leaf optical properties
      GNU General Public License v3.0
      •1•0•0•0•Updated Sep 17, 2020Sep 17, 2020

    • Wu_etal_2019_NewPhytologist

      Public
      Leaf-level spectra-trait PLSR models to estimate leaf age and Vcmax of tropical tree species using measurements of leaf reflectance
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 6, 2020Jan 6, 2020

    • UniSpec_Processing

      Public
      Python code for processing the output of the Unispec-DC spectrometer
      Python
      •
      GNU General Public License v2.0
      •1•2•12•0•Updated Jun 12, 2018Jun 12, 2018

    • R-GasExchange

      Public archive
      Simple scripts for processing LiCor 6400 gas exchange data
      R
      •5•4•0•1•Updated Apr 18, 2017Apr 18, 2017

    • UniSpec_Trigger

      Public
      Python scripts for aquiring data from Unispec-DC spectrometer
      Python
      •
      GNU General Public License v2.0
      •0•0•1•0•Updated Oct 29, 2015Oct 29, 2015

    • R-UniSpecDC-Tools

      Public
      A toolkit for processing UniSpec-DC spectral files
      R
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated May 28, 2015May 28, 2015