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* make sure json secrets method also injects values
* remove duplicate env variable
* refactor and introduce new field in target.json for secrets output method
* refactor and cleanup dictionary before writing to json file
* prevent model named the same as output file
* remove <user> for weblogic credentials
* do not complain existing secrets
* write new variable file to output dir if one is provided for target operation
* append the properties to the end of original properties file
* prevent complaints for @@env if target
* various fixes for handling variable files and output dir, added handling for existing secrets but comment out
* use target configuration validation method to check for whether reporting error
* change the output file to use existing variable file name and merge/replace existing properties
* empty username in secret if it is started with @@secret:
* fixing broken method used to generate script_hash
* change file names
* fix model file names comparison with additional_output logic
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