From 4d4bd81efeee05042198b53aebc9837add8db4b8 Mon Sep 17 00:00:00 2001 From: jalil Date: Wed, 7 Aug 2024 11:25:42 +0200 Subject: [PATCH] max workers for metrics --- src/api/comp_metric.yaml | 4 ++++ src/metrics/regression_1/script_all.py | 1 + .../run_grn_evaluation/{config.vsh.yaml => config.novsh.yaml} | 0 3 files changed, 5 insertions(+) rename src/workflows/run_grn_evaluation/{config.vsh.yaml => config.novsh.yaml} (100%) diff --git a/src/api/comp_metric.yaml b/src/api/comp_metric.yaml index 27cca8121..fbe61cf00 100644 --- a/src/api/comp_metric.yaml +++ b/src/api/comp_metric.yaml @@ -43,6 +43,10 @@ functionality: description: number of samples randomly drawn from perturbation data info: test_default: 200 + - name: --max_workers + type: integer + direction: input + default: 4 diff --git a/src/metrics/regression_1/script_all.py b/src/metrics/regression_1/script_all.py index f8c2d8aa7..2c1e78013 100644 --- a/src/metrics/regression_1/script_all.py +++ b/src/metrics/regression_1/script_all.py @@ -7,6 +7,7 @@ ## VIASH START par = { "perturbation_data": "resources/grn-benchmark/perturbation_data.h5ad", + 'max_workers': 4, 'reg_type': 'ridge', 'subsample': 1, } diff --git a/src/workflows/run_grn_evaluation/config.vsh.yaml b/src/workflows/run_grn_evaluation/config.novsh.yaml similarity index 100% rename from src/workflows/run_grn_evaluation/config.vsh.yaml rename to src/workflows/run_grn_evaluation/config.novsh.yaml