diff --git a/doc/_dvlpt/modules.rst b/doc/_dvlpt/modules.rst new file mode 100644 index 00000000..8de55918 --- /dev/null +++ b/doc/_dvlpt/modules.rst @@ -0,0 +1,7 @@ +src +=== + +.. toctree:: + :maxdepth: 4 + + openalea diff --git a/doc/_dvlpt/openalea.core.algo.rst b/doc/_dvlpt/openalea.core.algo.rst new file mode 100644 index 00000000..37b41291 --- /dev/null +++ b/doc/_dvlpt/openalea.core.algo.rst @@ -0,0 +1,30 @@ +openalea.core.algo package +========================== + +Submodules +---------- + +openalea.core.algo.dataflow\_copy module +---------------------------------------- + +.. automodule:: openalea.core.algo.dataflow_copy + :members: + :undoc-members: + :show-inheritance: + +openalea.core.algo.dataflow\_evaluation module +---------------------------------------------- + +.. automodule:: openalea.core.algo.dataflow_evaluation + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.algo + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.control.rst b/doc/_dvlpt/openalea.core.control.rst new file mode 100644 index 00000000..8a56cc7c --- /dev/null +++ b/doc/_dvlpt/openalea.core.control.rst @@ -0,0 +1,54 @@ +openalea.core.control package +============================= + +Submodules +---------- + +openalea.core.control.all module +-------------------------------- + +.. automodule:: openalea.core.control.all + :members: + :undoc-members: + :show-inheritance: + +openalea.core.control.control module +------------------------------------ + +.. automodule:: openalea.core.control.control + :members: + :undoc-members: + :show-inheritance: + +openalea.core.control.manager module +------------------------------------ + +.. automodule:: openalea.core.control.manager + :members: + :undoc-members: + :show-inheritance: + +openalea.core.control.pyserial module +------------------------------------- + +.. automodule:: openalea.core.control.pyserial + :members: + :undoc-members: + :show-inheritance: + +openalea.core.control.serialization module +------------------------------------------ + +.. automodule:: openalea.core.control.serialization + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.control + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.formatting.rst b/doc/_dvlpt/openalea.core.formatting.rst new file mode 100644 index 00000000..30d8afad --- /dev/null +++ b/doc/_dvlpt/openalea.core.formatting.rst @@ -0,0 +1,30 @@ +openalea.core.formatting package +================================ + +Submodules +---------- + +openalea.core.formatting.html module +------------------------------------ + +.. automodule:: openalea.core.formatting.html + :members: + :undoc-members: + :show-inheritance: + +openalea.core.formatting.util module +------------------------------------ + +.. automodule:: openalea.core.formatting.util + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.formatting + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.graph.interface.rst b/doc/_dvlpt/openalea.core.graph.interface.rst new file mode 100644 index 00000000..8fa90c89 --- /dev/null +++ b/doc/_dvlpt/openalea.core.graph.interface.rst @@ -0,0 +1,62 @@ +openalea.core.graph.interface package +===================================== + +Submodules +---------- + +openalea.core.graph.interface.graph module +------------------------------------------ + +.. automodule:: openalea.core.graph.interface.graph + :members: + :undoc-members: + :show-inheritance: + +openalea.core.graph.interface.graphconcept module +------------------------------------------------- + +.. automodule:: openalea.core.graph.interface.graphconcept + :members: + :undoc-members: + :show-inheritance: + +openalea.core.graph.interface.latticeconcept module +--------------------------------------------------- + +.. automodule:: openalea.core.graph.interface.latticeconcept + :members: + :undoc-members: + :show-inheritance: + +openalea.core.graph.interface.port\_graph module +------------------------------------------------ + +.. automodule:: openalea.core.graph.interface.port_graph + :members: + :undoc-members: + :show-inheritance: + +openalea.core.graph.interface.property\_graph module +---------------------------------------------------- + +.. automodule:: openalea.core.graph.interface.property_graph + :members: + :undoc-members: + :show-inheritance: + +openalea.core.graph.interface.treeconcept module +------------------------------------------------ + +.. automodule:: openalea.core.graph.interface.treeconcept + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.graph.interface + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.graph.rst b/doc/_dvlpt/openalea.core.graph.rst new file mode 100644 index 00000000..c62e9420 --- /dev/null +++ b/doc/_dvlpt/openalea.core.graph.rst @@ -0,0 +1,45 @@ +openalea.core.graph package +=========================== + +Subpackages +----------- + +.. toctree:: + + openalea.core.graph.interface + +Submodules +---------- + +openalea.core.graph.graph module +-------------------------------- + +.. automodule:: openalea.core.graph.graph + :members: + :undoc-members: + :show-inheritance: + +openalea.core.graph.id\_generator module +---------------------------------------- + +.. automodule:: openalea.core.graph.id_generator + :members: + :undoc-members: + :show-inheritance: + +openalea.core.graph.property\_graph module +------------------------------------------ + +.. automodule:: openalea.core.graph.property_graph + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.graph + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.interpreter.rst b/doc/_dvlpt/openalea.core.interpreter.rst new file mode 100644 index 00000000..37d71e41 --- /dev/null +++ b/doc/_dvlpt/openalea.core.interpreter.rst @@ -0,0 +1,30 @@ +openalea.core.interpreter package +================================= + +Submodules +---------- + +openalea.core.interpreter.ipython module +---------------------------------------- + +.. automodule:: openalea.core.interpreter.ipython + :members: + :undoc-members: + :show-inheritance: + +openalea.core.interpreter.python module +--------------------------------------- + +.. automodule:: openalea.core.interpreter.python + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.interpreter + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.plugin.builtin.rst b/doc/_dvlpt/openalea.core.plugin.builtin.rst new file mode 100644 index 00000000..30d72528 --- /dev/null +++ b/doc/_dvlpt/openalea.core.plugin.builtin.rst @@ -0,0 +1,10 @@ +openalea.core.plugin.builtin package +==================================== + +Module contents +--------------- + +.. automodule:: openalea.core.plugin.builtin + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.plugin.formatting.rst b/doc/_dvlpt/openalea.core.plugin.formatting.rst new file mode 100644 index 00000000..caaf3fe5 --- /dev/null +++ b/doc/_dvlpt/openalea.core.plugin.formatting.rst @@ -0,0 +1,38 @@ +openalea.core.plugin.formatting package +======================================= + +Submodules +---------- + +openalea.core.plugin.formatting.html module +------------------------------------------- + +.. automodule:: openalea.core.plugin.formatting.html + :members: + :undoc-members: + :show-inheritance: + +openalea.core.plugin.formatting.text module +------------------------------------------- + +.. automodule:: openalea.core.plugin.formatting.text + :members: + :undoc-members: + :show-inheritance: + +openalea.core.plugin.formatting.util module +------------------------------------------- + +.. automodule:: openalea.core.plugin.formatting.util + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.plugin.formatting + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.plugin.rst b/doc/_dvlpt/openalea.core.plugin.rst new file mode 100644 index 00000000..ca9b39b2 --- /dev/null +++ b/doc/_dvlpt/openalea.core.plugin.rst @@ -0,0 +1,70 @@ +openalea.core.plugin package +============================ + +Subpackages +----------- + +.. toctree:: + + openalea.core.plugin.builtin + openalea.core.plugin.formatting + +Submodules +---------- + +openalea.core.plugin.functor module +----------------------------------- + +.. automodule:: openalea.core.plugin.functor + :members: + :undoc-members: + :show-inheritance: + +openalea.core.plugin.instance module +------------------------------------ + +.. automodule:: openalea.core.plugin.instance + :members: + :undoc-members: + :show-inheritance: + +openalea.core.plugin.interface module +------------------------------------- + +.. automodule:: openalea.core.plugin.interface + :members: + :undoc-members: + :show-inheritance: + +openalea.core.plugin.manager module +----------------------------------- + +.. automodule:: openalea.core.plugin.manager + :members: + :undoc-members: + :show-inheritance: + +openalea.core.plugin.node module +-------------------------------- + +.. automodule:: openalea.core.plugin.node + :members: + :undoc-members: + :show-inheritance: + +openalea.core.plugin.plugin module +---------------------------------- + +.. automodule:: openalea.core.plugin.plugin + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.plugin + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.project.formatting.rst b/doc/_dvlpt/openalea.core.project.formatting.rst new file mode 100644 index 00000000..bcb23db3 --- /dev/null +++ b/doc/_dvlpt/openalea.core.project.formatting.rst @@ -0,0 +1,22 @@ +openalea.core.project.formatting package +======================================== + +Submodules +---------- + +openalea.core.project.formatting.html module +-------------------------------------------- + +.. automodule:: openalea.core.project.formatting.html + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.project.formatting + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.project.rst b/doc/_dvlpt/openalea.core.project.rst new file mode 100644 index 00000000..f36b369b --- /dev/null +++ b/doc/_dvlpt/openalea.core.project.rst @@ -0,0 +1,53 @@ +openalea.core.project package +============================= + +Subpackages +----------- + +.. toctree:: + + openalea.core.project.formatting + +Submodules +---------- + +openalea.core.project.configobj module +-------------------------------------- + +.. automodule:: openalea.core.project.configobj + :members: + :undoc-members: + :show-inheritance: + +openalea.core.project.manager module +------------------------------------ + +.. automodule:: openalea.core.project.manager + :members: + :undoc-members: + :show-inheritance: + +openalea.core.project.project module +------------------------------------ + +.. automodule:: openalea.core.project.project + :members: + :undoc-members: + :show-inheritance: + +openalea.core.project.serialization module +------------------------------------------ + +.. automodule:: openalea.core.project.serialization + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.project + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.rst b/doc/_dvlpt/openalea.core.rst new file mode 100644 index 00000000..63dd2dc0 --- /dev/null +++ b/doc/_dvlpt/openalea.core.rst @@ -0,0 +1,415 @@ +openalea.core package +===================== + +Subpackages +----------- + +.. toctree:: + + openalea.core.algo + openalea.core.control + openalea.core.formatting + openalea.core.graph + openalea.core.interpreter + openalea.core.plugin + openalea.core.project + openalea.core.scene + openalea.core.service + openalea.core.system + openalea.core.world + +Submodules +---------- + +openalea.core.actor module +-------------------------- + +.. automodule:: openalea.core.actor + :members: + :undoc-members: + :show-inheritance: + +openalea.core.alea module +------------------------- + +.. automodule:: openalea.core.alea + :members: + :undoc-members: + :show-inheritance: + +openalea.core.authors module +---------------------------- + +.. automodule:: openalea.core.authors + :members: + :undoc-members: + :show-inheritance: + +openalea.core.category module +----------------------------- + +.. automodule:: openalea.core.category + :members: + :undoc-members: + :show-inheritance: + +openalea.core.cli module +------------------------ + +.. automodule:: openalea.core.cli + :members: + :undoc-members: + :show-inheritance: + +openalea.core.codegen module +---------------------------- + +.. automodule:: openalea.core.codegen + :members: + :undoc-members: + :show-inheritance: + +openalea.core.color\_palette module +----------------------------------- + +.. automodule:: openalea.core.color_palette + :members: + :undoc-members: + :show-inheritance: + +openalea.core.compositenode module +---------------------------------- + +.. automodule:: openalea.core.compositenode + :members: + :undoc-members: + :show-inheritance: + +openalea.core.ctypes\_ext module +-------------------------------- + +.. automodule:: openalea.core.ctypes_ext + :members: + :undoc-members: + :show-inheritance: + +openalea.core.customexception module +------------------------------------ + +.. automodule:: openalea.core.customexception + :members: + :undoc-members: + :show-inheritance: + +openalea.core.data module +------------------------- + +.. automodule:: openalea.core.data + :members: + :undoc-members: + :show-inheritance: + +openalea.core.dataflow module +----------------------------- + +.. automodule:: openalea.core.dataflow + :members: + :undoc-members: + :show-inheritance: + +openalea.core.dataflow\_evaluation module +----------------------------------------- + +.. automodule:: openalea.core.dataflow_evaluation + :members: + :undoc-members: + :show-inheritance: + +openalea.core.dataflow\_state module +------------------------------------ + +.. automodule:: openalea.core.dataflow_state + :members: + :undoc-members: + :show-inheritance: + +openalea.core.datapool module +----------------------------- + +.. automodule:: openalea.core.datapool + :members: + :undoc-members: + :show-inheritance: + +openalea.core.export\_app module +-------------------------------- + +.. automodule:: openalea.core.export_app + :members: + :undoc-members: + :show-inheritance: + +openalea.core.external module +----------------------------- + +.. automodule:: openalea.core.external + :members: + :undoc-members: + :show-inheritance: + +openalea.core.factory module +---------------------------- + +.. automodule:: openalea.core.factory + :members: + :undoc-members: + :show-inheritance: + +openalea.core.factory\_decorator module +--------------------------------------- + +.. automodule:: openalea.core.factory_decorator + :members: + :undoc-members: + :show-inheritance: + +openalea.core.factory\_parser module +------------------------------------ + +.. automodule:: openalea.core.factory_parser + :members: + :undoc-members: + :show-inheritance: + +openalea.core.funcsigs module +----------------------------- + +.. automodule:: openalea.core.funcsigs + :members: + :undoc-members: + :show-inheritance: + +openalea.core.interface module +------------------------------ + +.. automodule:: openalea.core.interface + :members: + :undoc-members: + :show-inheritance: + +openalea.core.logger module +--------------------------- + +.. automodule:: openalea.core.logger + :members: + :undoc-members: + :show-inheritance: + +openalea.core.manager module +---------------------------- + +.. automodule:: openalea.core.manager + :members: + :undoc-members: + :show-inheritance: + +openalea.core.metaclass module +------------------------------ + +.. automodule:: openalea.core.metaclass + :members: + :undoc-members: + :show-inheritance: + +openalea.core.metadatadict module +--------------------------------- + +.. automodule:: openalea.core.metadatadict + :members: + :undoc-members: + :show-inheritance: + +openalea.core.model module +-------------------------- + +.. automodule:: openalea.core.model + :members: + :undoc-members: + :show-inheritance: + +openalea.core.model\_inout module +--------------------------------- + +.. automodule:: openalea.core.model_inout + :members: + :undoc-members: + :show-inheritance: + +openalea.core.node module +------------------------- + +.. automodule:: openalea.core.node + :members: + :undoc-members: + :show-inheritance: + +openalea.core.observer module +----------------------------- + +.. automodule:: openalea.core.observer + :members: + :undoc-members: + :show-inheritance: + +openalea.core.package module +---------------------------- + +.. automodule:: openalea.core.package + :members: + :undoc-members: + :show-inheritance: + +openalea.core.path module +------------------------- + +.. automodule:: openalea.core.path + :members: + :undoc-members: + :show-inheritance: + +openalea.core.pkgdict module +---------------------------- + +.. automodule:: openalea.core.pkgdict + :members: + :undoc-members: + :show-inheritance: + +openalea.core.pkgmanager module +------------------------------- + +.. automodule:: openalea.core.pkgmanager + :members: + :undoc-members: + :show-inheritance: + +openalea.core.pm\_extend module +------------------------------- + +.. automodule:: openalea.core.pm_extend + :members: + :undoc-members: + :show-inheritance: + +openalea.core.script\_library module +------------------------------------ + +.. automodule:: openalea.core.script_library + :members: + :undoc-members: + :show-inheritance: + +openalea.core.serialization module +---------------------------------- + +.. automodule:: openalea.core.serialization + :members: + :undoc-members: + :show-inheritance: + +openalea.core.session module +---------------------------- + +.. automodule:: openalea.core.session + :members: + :undoc-members: + :show-inheritance: + +openalea.core.settings module +----------------------------- + +.. automodule:: openalea.core.settings + :members: + :undoc-members: + :show-inheritance: + +openalea.core.signature module +------------------------------ + +.. automodule:: openalea.core.signature + :members: + :undoc-members: + :show-inheritance: + +openalea.core.signature2 module +------------------------------- + +.. automodule:: openalea.core.signature2 + :members: + :undoc-members: + :show-inheritance: + +openalea.core.singleton module +------------------------------ + +.. automodule:: openalea.core.singleton + :members: + :undoc-members: + :show-inheritance: + +openalea.core.threadmanager module +---------------------------------- + +.. automodule:: openalea.core.threadmanager + :members: + :undoc-members: + :show-inheritance: + +openalea.core.traitsui module +----------------------------- + +.. automodule:: openalea.core.traitsui + :members: + :undoc-members: + :show-inheritance: + +openalea.core.unittest\_tools module +------------------------------------ + +.. automodule:: openalea.core.unittest_tools + :members: + :undoc-members: + :show-inheritance: + +openalea.core.util module +------------------------- + +.. automodule:: openalea.core.util + :members: + :undoc-members: + :show-inheritance: + +openalea.core.version module +---------------------------- + +.. automodule:: openalea.core.version + :members: + :undoc-members: + :show-inheritance: + +openalea.core.vlab module +------------------------- + +.. automodule:: openalea.core.vlab + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.scene.rst b/doc/_dvlpt/openalea.core.scene.rst new file mode 100644 index 00000000..4eea6845 --- /dev/null +++ b/doc/_dvlpt/openalea.core.scene.rst @@ -0,0 +1,22 @@ +openalea.core.scene package +=========================== + +Submodules +---------- + +openalea.core.scene.vplscene module +----------------------------------- + +.. automodule:: openalea.core.scene.vplscene + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.scene + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.service.rst b/doc/_dvlpt/openalea.core.service.rst new file mode 100644 index 00000000..952bc86c --- /dev/null +++ b/doc/_dvlpt/openalea.core.service.rst @@ -0,0 +1,102 @@ +openalea.core.service package +============================= + +Submodules +---------- + +openalea.core.service.control module +------------------------------------ + +.. automodule:: openalea.core.service.control + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.data module +--------------------------------- + +.. automodule:: openalea.core.service.data + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.interface module +-------------------------------------- + +.. automodule:: openalea.core.service.interface + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.introspection module +------------------------------------------ + +.. automodule:: openalea.core.service.introspection + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.ipython module +------------------------------------ + +.. automodule:: openalea.core.service.ipython + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.mimetype module +------------------------------------- + +.. automodule:: openalea.core.service.mimetype + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.model module +---------------------------------- + +.. automodule:: openalea.core.service.model + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.plugin module +----------------------------------- + +.. automodule:: openalea.core.service.plugin + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.project module +------------------------------------ + +.. automodule:: openalea.core.service.project + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.run module +-------------------------------- + +.. automodule:: openalea.core.service.run + :members: + :undoc-members: + :show-inheritance: + +openalea.core.service.serialization module +------------------------------------------ + +.. automodule:: openalea.core.service.serialization + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.service + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.system.rst b/doc/_dvlpt/openalea.core.system.rst new file mode 100644 index 00000000..702050de --- /dev/null +++ b/doc/_dvlpt/openalea.core.system.rst @@ -0,0 +1,22 @@ +openalea.core.system package +============================ + +Submodules +---------- + +openalea.core.system.systemnodes module +--------------------------------------- + +.. automodule:: openalea.core.system.systemnodes + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.system + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.core.world.rst b/doc/_dvlpt/openalea.core.world.rst new file mode 100644 index 00000000..bbaa02a4 --- /dev/null +++ b/doc/_dvlpt/openalea.core.world.rst @@ -0,0 +1,22 @@ +openalea.core.world package +=========================== + +Submodules +---------- + +openalea.core.world.world module +-------------------------------- + +.. automodule:: openalea.core.world.world + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: openalea.core.world + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/_dvlpt/openalea.rst b/doc/_dvlpt/openalea.rst new file mode 100644 index 00000000..9adcfe80 --- /dev/null +++ b/doc/_dvlpt/openalea.rst @@ -0,0 +1,17 @@ +openalea package +================ + +Subpackages +----------- + +.. toctree:: + + openalea.core + +Module contents +--------------- + +.. automodule:: openalea + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/conf.py b/doc/conf.py index 6c5a1455..0e9d3872 100644 --- a/doc/conf.py +++ b/doc/conf.py @@ -149,7 +149,7 @@ # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes. -html_theme = 'default' +html_theme = 'sphinx_rtd_theme' # Theme options are theme-specific and customize the look and feel of a # theme further. For a list of options available for each theme, see the