diff --git a/.codex/rules/default.rules b/.codex/rules/default.rules
new file mode 100644
index 00000000..c54aeae2
--- /dev/null
+++ b/.codex/rules/default.rules
@@ -0,0 +1,4 @@
+prefix_rule(pattern=["uv"], decision="allow")
+prefix_rule(pattern=["gh"], decision="allow")
+prefix_rule(pattern=["just"], decision="allow")
+prefix_rule(pattern=["git"], decision="allow")
diff --git a/.codex/skills/agentify-repo/SKILL.md b/.codex/skills/agentify-repo/SKILL.md
new file mode 100644
index 00000000..72c3e571
--- /dev/null
+++ b/.codex/skills/agentify-repo/SKILL.md
@@ -0,0 +1,42 @@
+---
+name: agentify-repo
+description: "Incrementally add harness and tooling to an existing repo so it converges toward zach-stack safely over multiple passes."
+---
+
+# Agentify Repo
+
+Use this skill when asked to make an existing repo more agent-friendly without one-shot rewrites.
+
+## Core goal
+
+If required dependencies are not installed in the current environment, bootstrap them first:
+
+- `$install-skills https://github.com/openai/skills/tree/main/skills/.custom/zach-stack`
+- `$install-skills https://github.com/openai/skills/tree/main/skills/.custom/configure-codex`
+
+Set up harness/tooling in small, reversible steps that make the repo more verifiable and easier for agents to work with.
+
+## Recommended flow
+
+1. Baseline assessment: detect current stack, docs state, tests, lints, and CI.
+2. Harness setup phase: add/update only low-risk structure first (`docs/`, `Justfile`, command discoverability, test map).
+3. Apply `zach-stack`-aligned improvements in small batches:
+   - tooling defaults relevant to current stack
+   - testing additions by priority
+   - docs upkeep and file ownership mapping
+4. Validate each phase.
+5. Pause with explicit next milestone.
+
+## Hard rules
+
+- No broad migration in one run unless explicitly authorized.
+- Prefer additive changes and stable commit points.
+- If unknown/legacy constraints exist, defer and document them instead of forcing defaults.
+- Ask before any environment or rules-file changes that require trust-sensitive decisions.
+
+## References
+
+- `references/incremental-harness.md`
+- `references/convergence-phases.md`
+- `references/rollback-and-safety.md`
+- `../zach-stack` for target conventions.
diff --git a/.codex/skills/agentify-repo/agents/openai.yaml b/.codex/skills/agentify-repo/agents/openai.yaml
new file mode 100644
index 00000000..c76ca4e4
--- /dev/null
+++ b/.codex/skills/agentify-repo/agents/openai.yaml
@@ -0,0 +1,4 @@
+interface:
+  display_name: "Agentify Repo"
+  short_description: "Incrementally harden existing repos with zach-stack conventions."
+  default_prompt: "Use $agentify-repo to add agent-friendly tooling in safe milestones."
diff --git a/.codex/skills/agentify-repo/references/convergence-phases.md b/.codex/skills/agentify-repo/references/convergence-phases.md
new file mode 100644
index 00000000..78a4ae3f
--- /dev/null
+++ b/.codex/skills/agentify-repo/references/convergence-phases.md
@@ -0,0 +1,19 @@
+# Convergence phases
+
+## Phase 0: Discovery
+
+- Detect existing stack and constraints.
+- Record what cannot be changed safely in one pass.
+
+## Phase 1: Surface hardening
+
+- Docs + Justfile + lightweight test discoverability.
+- Add project-specific lint/test quick checks.
+
+## Phase 2: Toolchain alignment
+
+- Add `zach-stack` defaults where they do not disrupt current architecture.
+
+## Phase 3+: Optional deepening
+
+- Introduce additional stack pieces (workspaces, visualization layout, docs automation, etc.) as explicit follow-up passes.
diff --git a/.codex/skills/agentify-repo/references/incremental-harness.md b/.codex/skills/agentify-repo/references/incremental-harness.md
new file mode 100644
index 00000000..1ec9b7c1
--- /dev/null
+++ b/.codex/skills/agentify-repo/references/incremental-harness.md
@@ -0,0 +1,16 @@
+# Incremental harness setup
+
+## Purpose
+
+Build the operating surface needed for agents before enforcing deeper stack shifts.
+
+## Initial changes (safe first)
+
+- Add/normalize `docs/` with a current file-map and runbook.
+- Add/refresh `Justfile` command palette.
+- Introduce a lightweight test index and smoke test list.
+- Clarify command/tool ownership in docs.
+
+## Principle
+
+The harness layer should reduce uncertainty first: if agents can discover and run stable commands, deeper changes are cheaper and safer.
diff --git a/.codex/skills/agentify-repo/references/rollback-and-safety.md b/.codex/skills/agentify-repo/references/rollback-and-safety.md
new file mode 100644
index 00000000..ce23b55b
--- /dev/null
+++ b/.codex/skills/agentify-repo/references/rollback-and-safety.md
@@ -0,0 +1,20 @@
+# Rollback and safety
+
+## Why it matters
+
+Incremental changes are useful only if each step is reversible.
+
+## Safety pattern
+
+- Make one conceptual category of change at a time.
+- Validate commands and tests after each change set.
+- Record a simple checkpoint note:
+  - What changed
+  - Why it changed
+  - How to revert
+
+## Example rollback triggers
+
+- Unexpected behavioral diff
+- Test coverage mismatch introduced by command changes
+- Documentation or automation drift
diff --git a/.codex/skills/configure-codex/SKILL.md b/.codex/skills/configure-codex/SKILL.md
new file mode 100644
index 00000000..ec80204b
--- /dev/null
+++ b/.codex/skills/configure-codex/SKILL.md
@@ -0,0 +1,38 @@
+---
+name: configure-codex
+description: "Conservatively configure `.codex/rules/default.rules` and Codex environment setup for repo and user ergonomics."
+---
+
+# Configure Codex
+
+Use this skill when asked to update Codex rules, command permissions, or environment setup for repository work.
+
+## Scope
+- `.codex/rules/default.rules` updates.
+- Command allow-list selection.
+- Codex environment/worktree ergonomics.
+- Guidance for repo-scoped vs user-scoped settings.
+
+## Guarded workflow
+
+1. Inventory current constraints and user intent.
+2. Propose only relevant allowed command families (e.g., uv, just, pnpm, gh, glab).
+3. Ask for confirmation before writing rule updates.
+4. Apply minimally and explain impact.
+5. Validate the new command surface and leave a follow-up note.
+
+## Conservative defaults
+
+- Keep allow-lists minimal.
+- Prefer repo-only permissions over broad global overrides.
+- Add no commands that are not used by the project.
+
+## Troubleshooting
+
+- If `.codex/rules` is not writable in the current workspace, update the user-level `/Users/zach.parent/.codex/rules/default.rules` after confirming scope and keep that in notes.
+
+## References
+
+- `references/rules-default.md`
+- `references/allowed-commands-matrix.md`
+- `references/codex-environment.md`
diff --git a/.codex/skills/configure-codex/agents/openai.yaml b/.codex/skills/configure-codex/agents/openai.yaml
new file mode 100644
index 00000000..ffaf935d
--- /dev/null
+++ b/.codex/skills/configure-codex/agents/openai.yaml
@@ -0,0 +1,4 @@
+interface:
+  display_name: "Configure Codex"
+  short_description: "Set up codex rules and environment configuration safely."
+  default_prompt: "Use $configure-codex to propose and apply safe Codex configuration updates."
diff --git a/.codex/skills/configure-codex/references/allowed-commands-matrix.md b/.codex/skills/configure-codex/references/allowed-commands-matrix.md
new file mode 100644
index 00000000..a05fde93
--- /dev/null
+++ b/.codex/skills/configure-codex/references/allowed-commands-matrix.md
@@ -0,0 +1,17 @@
+# Allowed command matrix (`configure-codex`)
+
+## Always avoid by default
+
+- Blanket escalation of broad shell commands.
+- Universal global allow-lists without project need.
+
+## Recommended matrix by project type
+
+- **Web-first**: `pnpm`, `just`, `gh`, optional `uv`.
+- **Python-first**: `uv`, `just`, `gh`, optional `glab`.
+- **Mixed**: web + python commands only where actively used.
+
+## Confirmation requirements
+
+- Ask before enabling commands not currently used by the repo.
+- Keep user-visible logs of every newly enabled command.
diff --git a/.codex/skills/configure-codex/references/codex-environment.md b/.codex/skills/configure-codex/references/codex-environment.md
new file mode 100644
index 00000000..418065e9
--- /dev/null
+++ b/.codex/skills/configure-codex/references/codex-environment.md
@@ -0,0 +1,19 @@
+# Codex environment and worktree setup
+
+## Objective
+
+Make agent work predictable and repeatable in local and customer environments.
+
+## Setup areas
+
+- command presets for project startup
+- worktree naming and path strategy
+- reusable command sequences via `Justfile`
+- lightweight onboarding docs for Codex behavior
+
+## Recommendations
+
+- Keep environment setup documented in `docs/`.
+- Separate repo updates from user-profile updates.
+- Validate environment commands after each phase.
+- Use conservative defaults and escalate only as needed.
diff --git a/.codex/skills/configure-codex/references/rules-default.md b/.codex/skills/configure-codex/references/rules-default.md
new file mode 100644
index 00000000..ffdcd324
--- /dev/null
+++ b/.codex/skills/configure-codex/references/rules-default.md
@@ -0,0 +1,47 @@
+# `.codex/rules/default.rules` guidance
+
+## Principles
+
+- Keep permissions scoped to the project workflow.
+- Prefer minimal, explicit commands.
+- Ask before writing any potentially sensitive settings.
+
+## Typical command families
+
+- `uv`: Python install/test/runtime commands
+- `just`: repeated repo task orchestration
+- `pnpm`: node tooling for web apps
+- `gh`: GitHub workflows and issue/pr management
+- `glab`: GitLab/GLab workflow parity where used
+
+## Process
+
+- Propose a diff, confirm with user, then apply.
+- Re-check the rule set after each commit boundary.
+## Example `prefix_rule` syntax
+
+```python
+prefix_rule(
+    pattern = ["uv", "sync"],
+    decision = "allow",
+    justification = "Allow project dependency sync outside sandbox",
+    match = [
+        "uv sync",
+        "uv sync --locked",
+    ],
+    not_match = ["uv run sync"],
+)
+```
+
+Use `match` and `not_match` as inline rule tests so malformed patterns fail fast when the rule file is loaded.
+
+## Validate the rules file
+
+Run a rule check after updating `default.rules`:
+
+```bash
+codex execpolicy check --pretty --rules .codex/rules/default.rules -- uv sync
+```
+
+Use the same command for any command you changed in the allow list.
+
diff --git a/.codex/skills/init-repo/SKILL.md b/.codex/skills/init-repo/SKILL.md
new file mode 100644
index 00000000..612d19e1
--- /dev/null
+++ b/.codex/skills/init-repo/SKILL.md
@@ -0,0 +1,40 @@
+---
+name: init-repo
+description: "Initialize a new repo with a fast, testable, documented, agent-friendly setup using zach-stack defaults."
+---
+
+# Init Repo
+
+Use this skill when a user asks to start a new project or bootstrap an empty repository.
+
+## Workflow
+
+If required dependencies are missing in this environment, bootstrap them first:
+
+- `$install-skills https://github.com/openai/skills/tree/main/skills/.custom/zach-stack`
+- `$install-skills https://github.com/openai/skills/tree/main/skills/.custom/configure-codex`
+
+1. Capture constraints and ask clarifying questions only if ambiguous.
+2. Choose a stack profile: web, python, visualization, or mixed.
+3. Create a phase-1 scaffold that is minimal but complete:
+   - `docs/` with setup and file map starter.
+   - `Justfile` with repeatable agent commands.
+   - Testing skeleton (unit + at least one integration check).
+   - Linting/pre-commit baseline for selected stack.
+   - Optional `.codex/rules/default.rules` proposal via `configure-codex`.
+4. Add technology-specific defaults from `zach-stack`:
+   - web defaults (framework-light vs lightweight React)
+   - Python defaults (`uv`)
+   - workspace structure if mixed.
+5. Define the first milestone commit boundary.
+
+## Guardrails
+
+- Keep `init-repo` incremental: prefer Phase 1 completion over full build-out.
+- Default to minimal files and explain what is deferred.
+- Never write sensitive agent/environment rules without explicit user confirmation.
+
+## References
+
+- Use `references/new-repo-runbook.md` for scaffold templates and command defaults.
+- Use `../zach-stack` for stack-specific decisions.
diff --git a/.codex/skills/init-repo/agents/openai.yaml b/.codex/skills/init-repo/agents/openai.yaml
new file mode 100644
index 00000000..3aa15dd0
--- /dev/null
+++ b/.codex/skills/init-repo/agents/openai.yaml
@@ -0,0 +1,4 @@
+interface:
+  display_name: "Init Repo"
+  short_description: "Bootstrap a new repo with testable and agent-friendly defaults."
+  default_prompt: "Use $init-repo to scaffold a new repository with zach-stack conventions."
diff --git a/.codex/skills/init-repo/references/new-repo-runbook.md b/.codex/skills/init-repo/references/new-repo-runbook.md
new file mode 100644
index 00000000..d89c68c0
--- /dev/null
+++ b/.codex/skills/init-repo/references/new-repo-runbook.md
@@ -0,0 +1,21 @@
+# New repo runbook
+
+## Phase 1 scaffold (minimum)
+
+- Create `docs/` and add a compact onboarding file.
+- Add `Justfile` with build/test/lint commands.
+- Add dependency/tool defaults for selected stack (`pnpm` for web, `uv` for Python).
+- Add testing skeleton for targeted unit and integration coverage.
+- Add workspace/docs conventions in notes for future phases.
+
+## Recommended first tasks
+
+- Choose stack from `zach-stack` profiles.
+- Add contributor-level checklist for tests and docs updates.
+- Add a clean rollback point before changing environment/config files.
+
+## Suggested outputs by stack
+
+- Web: Tailwind baseline + lightweight project setup + test/check commands.
+- Python: `pyproject.toml`/`uv` convention + basic test command.
+- Mixed: two-phase plan with clear module boundaries and shared-data workspace notes.
diff --git a/.codex/skills/zach-stack/SKILL.md b/.codex/skills/zach-stack/SKILL.md
new file mode 100644
index 00000000..ca1398ab
--- /dev/null
+++ b/.codex/skills/zach-stack/SKILL.md
@@ -0,0 +1,58 @@
+---
+name: zach-stack
+description: "Define opinionated conventions for testable, well-documented, agent-friendly repos. Use for stack selection and application defaults."
+---
+
+# Zach-Stack
+
+Use this skill when asked to define or apply a preferred stack for a new/existing project.
+
+## Purpose
+
+`zach-stack` is the compact decision source for:
+- project scaffolding defaults
+- tooling conventions
+- test strategy expectations
+- docs/lifecycle defaults
+- Codex-friendly repository structure
+
+## When to use
+
+- before or during `init-repo`
+- during `agentify-repo` as the target conventions
+- when a team member asks for your preferred stack defaults
+
+## Core rules (high signal)
+
+- **Minimal web by default**: prefer plain HTML/CSS/JS when requirements are simple.
+- **Dynamic web**: choose a lightweight React setup when needed for stateful interactions.
+- **Complex static sites**: prefer Eleventy.
+- **CSS**: default to Tailwind.
+- **Python work**: use `uv` for package management and virtual environments.
+- **Workspaces**: prefer workspace-based organization for multi-module projects.
+- **CLI stack**: prefer **Typer** for new CLIs; use **Click** when existing codebases already use it.
+- **Testing**: add targeted unit tests and at least one integration/acceptance layer.
+- **Frontend checks**: include automated checks that cover real user workflows.
+- **Playwright path**: use Playwright CLI for exploration and flow debugging; use Playwright-driven E2E where applicable.
+- **Visualization**: prefer Streamlit + Plotly for analytics UI.
+- **Project shape for shared data**: use a dedicated workspace/module for data, plus workspace boundaries for Streamlit/compute when needed.
+- **Standalone scripts**: keep CLIs standalone with minimal dependencies and explicit script-level dependency boundaries; keep CLIs minimally scoped.
+- **Docs as source of truth**: every project must have `docs/` and keep it current with code changes.
+- **Automation**: include `Justfile` in most repos for repeatable agent tasks.
+- **Pre-commit**: always define pre-commit via project-native tooling (`pnpm` or `uv`).
+
+## Process
+
+1. Ask for project intent: web app, python service, data app, or mixed.
+2. Select a minimal stack from these preferences.
+3. Confirm constraints that override defaults (security, infra, legacy platform).
+4. Apply only what is relevant for the project phase.
+
+## References
+
+- `references/web.md` for web defaults, CSS, and Playwright use.
+- `references/python.md` for UV, workspace, and Python conventions.
+- `references/testing.md` for test structure expectations.
+- `references/docs.md` for living docs patterns.
+- `references/workspaces.md` for shared workspaces in mixed stacks.
+- `references/resources.md` for external source references.
diff --git a/.codex/skills/zach-stack/agents/openai.yaml b/.codex/skills/zach-stack/agents/openai.yaml
new file mode 100644
index 00000000..12336df6
--- /dev/null
+++ b/.codex/skills/zach-stack/agents/openai.yaml
@@ -0,0 +1,4 @@
+interface:
+  display_name: "Zach Stack"
+  short_description: "Opinionated stack defaults for agent-friendly repos."
+  default_prompt: "Use $zach-stack to define technology and workflow defaults for the repo."
diff --git a/.codex/skills/zach-stack/references/docs.md b/.codex/skills/zach-stack/references/docs.md
new file mode 100644
index 00000000..4479841d
--- /dev/null
+++ b/.codex/skills/zach-stack/references/docs.md
@@ -0,0 +1,19 @@
+# Documentation conventions (`zach-stack`)
+
+## Minimum
+
+- Every repo must include `docs/`.
+- Docs should include a file index/structure map and quick update points.
+- Keep docs updated as part of meaningful code changes.
+
+## Practical expectations
+
+- Maintain short-lived markdown docs that stay current with code.
+- Include architecture and setup notes in `docs/` for onboarding.
+- Keep one canonical source-of-truth for setup commands and developer workflows.
+- Add a short, versioned list of files and responsibility in `docs/file-map.md` (or equivalent).
+
+## Docs quality and checks
+
+- Use docs linting where practical to catch stale references.
+- Treat docs quality as part of completion criteria before considering a change done.
diff --git a/.codex/skills/zach-stack/references/python.md b/.codex/skills/zach-stack/references/python.md
new file mode 100644
index 00000000..3807a99e
--- /dev/null
+++ b/.codex/skills/zach-stack/references/python.md
@@ -0,0 +1,33 @@
+# Python conventions (`zach-stack`)
+
+## Scope
+Use for Python-heavy or mixed repos with Python services/modules.
+
+## Tooling defaults
+
+- Use `uv` for dependency/developer workflow.
+- Prefer workspace separation when there are multiple independent Python modules.
+- Use a dedicated `workspace` structure when teams need clean boundaries for CLI, service, library, and jobs.
+
+## CLI conventions
+
+- Prefer **Typer** for new CLI development.
+- Accept **Click** when existing codepaths or existing teams standardize on Click.
+- Keep CLI entrypoints near interfaces and minimize coupling to service internals.
+- Make scripts standalone where practical:
+  - put CLI dependency declarations in the nearest packaging boundary
+  - avoid importing large module stacks at module import time
+  - keep defaults explicit to reduce runtime surprises
+
+## App architecture recommendations
+
+- If data is consumed by both core services and visualization:
+  - create a separate data workspace/project for shared contracts and loaders
+  - create separate consumer workspaces (for example API layer, Streamlit app)
+- For data visualization: use Streamlit + Plotly.
+- If the project is small and one-purpose, keep one workspace and add explicit module boundaries.
+
+## Maintenance and tests
+
+- Keep unit tests near implementation modules.
+- Add integration tests for external boundaries (HTTP handlers, file contracts, job inputs).
diff --git a/.codex/skills/zach-stack/references/resources.md b/.codex/skills/zach-stack/references/resources.md
new file mode 100644
index 00000000..bbd5eacb
--- /dev/null
+++ b/.codex/skills/zach-stack/references/resources.md
@@ -0,0 +1,13 @@
+# External references for `zach-stack`
+
+- [Agent Skills homepage](https://agentskills.io/home)
+- [Agent Skills specification](https://agentskills.io/specification)
+- [What are Skills?](https://agentskills.io/what-are-skills)
+- [Harness engineering at OpenAI](https://openai.com/index/harness-engineering/)
+- [Testing Agent Skills with Evals](https://developers.openai.com/blog/eval-skills/)
+
+## Why these references are here
+
+- Keep SKILL files concise and point to standards-based context when needed.
+- Encourage incremental, low-friction automation.
+- Reinforce evaluation and quality checks for repeatable agent behavior.
diff --git a/.codex/skills/zach-stack/references/testing.md b/.codex/skills/zach-stack/references/testing.md
new file mode 100644
index 00000000..e716a44b
--- /dev/null
+++ b/.codex/skills/zach-stack/references/testing.md
@@ -0,0 +1,45 @@
+# Testing conventions (`zach-stack`)
+
+## CLI strategy defaults
+
+- **CLI frameworks**: prefer `Typer` for new CLI implementations.
+- **CLI alternatives**: `Click` is acceptable for existing or click-first codebases and when explicit subcommand ergonomics are required.
+- **Dependency hygiene**: keep CLI modules lightweight; make scripts as self-contained and dependency-bounded as possible by:
+  - placing entrypoints in dedicated files/modules
+  - scoping dependencies to the package/script boundary
+  - avoiding monolithic "utility" scripts with broad transitive imports
+
+## Test expectations by framework
+
+- Add focused unit tests for parsing, argument validation, and command routing.
+- Add integration-style tests for command side effects (filesystem, subprocess calls, exit codes).
+- For **Typer** CLIs:
+  - test commands with `click.testing.CliRunner` syntax (Typer uses Click internally)
+  - verify exit codes and output
+  - verify help text and global options
+- For **Click** CLIs:
+  - test via `click.testing.CliRunner`
+  - validate success and failure paths
+  - include edge-case tests around argument parsing and exit codes
+- For both, assert deterministic outputs where possible.
+
+## Frontend checks
+
+- For UI work, include interaction-level validation against real page behavior (manual Playwright flow check and automated checks where feasible).
+
+## Docs/test coupling
+
+- Every major behavior change should include an updated doc entry describing intent and validation command.
+- Avoid relying on broad integration tests only; use focused tests for failure isolation.
+
+## CLI command style for single-command scripts
+
+- For scripts intended to have a single action, prefer exposing the behavior on the default command and avoid a dedicated `run` subcommand label.
+- This keeps invocation simple for agents: `uv run scripts/<tool>.py`.
+
+## Examples
+
+- `uv run scripts/validate-custom-skills.py` (default entrypoint)
+- `uv run scripts/run-skill-evals.py`
+- `uv run scripts/test-custom-skills.py`
+- `uv run scripts/sync-custom-skill.py sync --dry-run`
diff --git a/.codex/skills/zach-stack/references/web.md b/.codex/skills/zach-stack/references/web.md
new file mode 100644
index 00000000..e7c7e814
--- /dev/null
+++ b/.codex/skills/zach-stack/references/web.md
@@ -0,0 +1,28 @@
+# Web conventions (`zach-stack`)
+
+## Scope
+Use when a project includes frontend code and needs a consistent, lightweight stack.
+
+## Conventions
+
+- Use lightweight, framework-free implementations for simple pages.
+- For dynamic client behavior, prefer lightweight React over heavy abstraction layers.
+- Use Tailwind for styling defaults.
+- For content-heavy or markdown-driven complex static sites, use Eleventy.
+- Use `pnpm` as package manager by default for web tooling.
+- Keep browser-facing code testable with at least:
+  - unit-level checks for pure functions/components (or equivalent)
+  - integration tests for user flows
+  - end-to-end checks for critical UI paths
+
+## Playwright and checks
+
+- For interactive UI exploration and triage, use Playwright CLI first.
+- For stable e2e coverage, standardize on Playwright-based automation in CI for key flows.
+- For Python-facing web UIs, include the Python Playwright stack where helpful.
+- Keep selectors and test semantics resilient to refactors.
+
+## Decision points
+
+- If no interactive state and no component orchestration are needed: no React.
+- If there are interactive widgets, state-driven forms, or realtime updates: use React.
diff --git a/.codex/skills/zach-stack/references/workspaces.md b/.codex/skills/zach-stack/references/workspaces.md
new file mode 100644
index 00000000..554254eb
--- /dev/null
+++ b/.codex/skills/zach-stack/references/workspaces.md
@@ -0,0 +1,12 @@
+# Workspace conventions (`zach-stack`)
+
+## Rationale
+
+Use workspaces to separate concerns, reduce coupling, and support agent navigation.
+
+## Typical patterns
+
+- `workspace` for source code organization when multiple modules are expected.
+- Separate project for shared data access layer if data feeds multiple components.
+- Separate Streamlit app workspace for visualization and UX.
+- Keep dependency graphs explicit and directional (core < data < apps).
diff --git a/.github/workflows/check.yml b/.github/workflows/check.yml
new file mode 100644
index 00000000..7b40db40
--- /dev/null
+++ b/.github/workflows/check.yml
@@ -0,0 +1,47 @@
+name: check
+
+on:
+  pull_request:
+  push:
+    branches:
+      - main
+
+jobs:
+  check:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.12'
+
+      - name: Set up uv
+        uses: astral-sh/setup-uv@v7
+        with:
+          version: 0.10.0
+          enable-cache: true
+
+      - name: Install project dependencies
+        run: uv sync --locked
+
+      - name: Install pre-commit hooks
+        run: uv run pre-commit install --install-hooks
+
+      - name: Run pre-commit checks
+        run: uv run pre-commit run --all-files
+
+      - name: Run type checks
+        run: uv run mypy
+
+      - name: Run skill tests
+        run: uv run scripts/test-custom-skills.py
+
+      - name: Run skill evals
+        run: uv run scripts/run-skill-evals.py
+
+      - name: Prune uv cache for CI
+        if: always()
+        run: uv cache prune --ci
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
new file mode 100644
index 00000000..964ce0cf
--- /dev/null
+++ b/.pre-commit-config.yaml
@@ -0,0 +1,33 @@
+repos:
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.6.4
+    hooks:
+      - id: ruff
+        name: ruff lint
+        args: ["--fix", "--exit-non-zero-on-fix"]
+      - id: ruff-format
+        name: ruff format
+
+  - repo: local
+    hooks:
+      - id: skills-lint
+        name: custom skills lint/tests
+        entry: ./scripts/test-custom-skills.py
+        language: system
+        pass_filenames: false
+
+  - repo: local
+    hooks:
+      - id: skills-evals
+        name: custom skill evals
+        entry: ./scripts/run-skill-evals.py
+        language: system
+        pass_filenames: false
+
+  - repo: local
+    hooks:
+      - id: mypy-scripts
+        name: mypy script type check
+        entry: uv run mypy
+        language: system
+        files: ^scripts/.*\.py$
diff --git a/AGENTS.md b/AGENTS.md
new file mode 100644
index 00000000..fadac2a0
--- /dev/null
+++ b/AGENTS.md
@@ -0,0 +1,22 @@
+# Repository Agents Instructions
+
+- Purpose: this repository is a personal fork of the OpenAI Skills catalog plus a `.custom` namespace for your own workflows.
+- Scope: keep the public skill catalogs untouched unless explicitly requested.
+- Keep new skills focused on role and workflow, and place detailed guidance under `references/`.
+- Prefer concise SKILL files with one-level references.
+- Use incremental changes for this skills suite and commit in logical milestones.
+- Do not add scripts unless they are essential and deterministic.
+- No README/CHANGELOG style collateral is required inside a skill.
+
+## Linting and tests
+
+Run `uv run scripts/test-custom-skills.py` before committing `.custom` changes.
+
+Install pre-commit hooks once with:
+`PRE_COMMIT_HOME=.pre-commit-cache pre-commit install --install-hooks`.
+
+Run pre-commit checks:
+`pre-commit run --all-files` (or `just pre-commit-check`).
+
+Hooks install command in this repo uses a local pre-commit home:
+`PRE_COMMIT_HOME=.pre-commit-cache pre-commit install --install-hooks`.
diff --git a/evals/agentify-repo/prompt_set.csv b/evals/agentify-repo/prompt_set.csv
new file mode 100644
index 00000000..ebcc7e71
--- /dev/null
+++ b/evals/agentify-repo/prompt_set.csv
@@ -0,0 +1,4 @@
+prompt_id,prompt
+incremental_harness_existing_repo,"Make this existing repo more agent-friendly, but do it incrementally and avoid risky broad rewrites."
+legacy_constraints_present,"Harden a legacy repo for agents. There are unknown constraints and we need reversible changes."
+rules_change_request,"Improve agent workflow in a repo and consider codex/rules changes only if necessary."
diff --git a/evals/agentify-repo/test.jsonl b/evals/agentify-repo/test.jsonl
new file mode 100644
index 00000000..941603e2
--- /dev/null
+++ b/evals/agentify-repo/test.jsonl
@@ -0,0 +1,3 @@
+{"case_id":"skill-structure","prompt_id":"incremental_harness_existing_repo","skill":"agentify-repo","checks":[{"kind":"file_exists","path":"SKILL.md"},{"kind":"file_exists","path":"agents/openai.yaml"},{"kind":"file_exists","path":"references/incremental-harness.md"},{"kind":"file_exists","path":"references/convergence-phases.md"},{"kind":"file_exists","path":"references/rollback-and-safety.md"},{"kind":"frontmatter_field_equals","path":"SKILL.md","field":"name","value":"agentify-repo"},{"kind":"contains_text","path":"agents/openai.yaml","text":"$agentify-repo"}]}
+{"case_id":"incremental-flow-and-guardrails","prompt_id":"legacy_constraints_present","skill":"agentify-repo","checks":[{"kind":"contains_all","path":"SKILL.md","texts":["Baseline assessment: detect current stack, docs state, tests, lints, and CI.","Harness setup phase: add/update only low-risk structure first","Apply `zach-stack`-aligned improvements in small batches","No broad migration in one run unless explicitly authorized.","Prefer additive changes and stable commit points.","If unknown/legacy constraints exist, defer and document them instead of forcing defaults."]}]}
+{"case_id":"trust-sensitive-rules-changes","prompt_id":"rules_change_request","skill":"agentify-repo","checks":[{"kind":"contains_text","path":"SKILL.md","text":"Ask before any environment or rules-file changes that require trust-sensitive decisions."},{"kind":"contains_text","path":"SKILL.md","text":"../zach-stack"}]}
diff --git a/evals/configure-codex/prompt_set.csv b/evals/configure-codex/prompt_set.csv
new file mode 100644
index 00000000..97d9c7f9
--- /dev/null
+++ b/evals/configure-codex/prompt_set.csv
@@ -0,0 +1,4 @@
+prompt_id,prompt
+minimal_rules_update,"Update Codex rules for this repo, but keep the allowed commands minimal and only what the project needs."
+repo_vs_user_scope,"Set up Codex configuration for a repo, and explain when repo-scoped vs user-scoped settings should be used."
+rules_dir_not_writable,"Configure Codex, but assume the repo .codex/rules path is not writable."
diff --git a/evals/configure-codex/test.jsonl b/evals/configure-codex/test.jsonl
new file mode 100644
index 00000000..660af237
--- /dev/null
+++ b/evals/configure-codex/test.jsonl
@@ -0,0 +1,3 @@
+{"case_id":"skill-structure","prompt_id":"minimal_rules_update","skill":"configure-codex","checks":[{"kind":"file_exists","path":"SKILL.md"},{"kind":"file_exists","path":"agents/openai.yaml"},{"kind":"file_exists","path":"references/rules-default.md"},{"kind":"file_exists","path":"references/allowed-commands-matrix.md"},{"kind":"file_exists","path":"references/codex-environment.md"},{"kind":"frontmatter_field_equals","path":"SKILL.md","field":"name","value":"configure-codex"},{"kind":"contains_text","path":"agents/openai.yaml","text":"$configure-codex"}]}
+{"case_id":"guarded-workflow-and-minimal-permissions","prompt_id":"minimal_rules_update","skill":"configure-codex","checks":[{"kind":"contains_all","path":"SKILL.md","texts":[".codex/rules/default.rules","Propose only relevant allowed command families","Ask for confirmation before writing rule updates.","Keep allow-lists minimal.","Prefer repo-only permissions over broad global overrides.","Add no commands that are not used by the project."]}]}
+{"case_id":"fallback-user-level-rules-path","prompt_id":"rules_dir_not_writable","skill":"configure-codex","checks":[{"kind":"contains_text","path":"SKILL.md","text":"/Users/zach.parent/.codex/rules/default.rules"},{"kind":"contains_text","path":"SKILL.md","text":"after confirming scope"}]}
diff --git a/evals/init-repo/prompt_set.csv b/evals/init-repo/prompt_set.csv
new file mode 100644
index 00000000..18824d33
--- /dev/null
+++ b/evals/init-repo/prompt_set.csv
@@ -0,0 +1,4 @@
+prompt_id,prompt
+bootstrap_python_repo,"Start a new Python project and scaffold a minimal but complete phase-1 repository for agent-friendly work."
+bootstrap_mixed_repo,"Initialize a mixed project repo with docs, testing, and repeatable commands, but keep it incremental."
+rules_confirmation_needed,"Bootstrap a new repo and suggest Codex rules only if the user explicitly confirms."
diff --git a/evals/init-repo/test.jsonl b/evals/init-repo/test.jsonl
new file mode 100644
index 00000000..93ac8736
--- /dev/null
+++ b/evals/init-repo/test.jsonl
@@ -0,0 +1,3 @@
+{"case_id":"skill-structure","prompt_id":"bootstrap_python_repo","skill":"init-repo","checks":[{"kind":"file_exists","path":"SKILL.md"},{"kind":"file_exists","path":"agents/openai.yaml"},{"kind":"file_exists","path":"references/new-repo-runbook.md"},{"kind":"frontmatter_field_equals","path":"SKILL.md","field":"name","value":"init-repo"},{"kind":"contains_text","path":"agents/openai.yaml","text":"$init-repo"}]}
+{"case_id":"phase1-scaffold-expectations","prompt_id":"bootstrap_mixed_repo","skill":"init-repo","checks":[{"kind":"contains_all","path":"SKILL.md","texts":["Choose a stack profile: web, python, visualization, or mixed.","Create a phase-1 scaffold that is minimal but complete:","`docs/` with setup and file map starter.","`Justfile` with repeatable agent commands.","Testing skeleton (unit + at least one integration check).","Linting/pre-commit baseline for selected stack.","Add technology-specific defaults from `zach-stack`:"]}]}
+{"case_id":"rules-safety-and-zach-stack-linkage","prompt_id":"rules_confirmation_needed","skill":"init-repo","checks":[{"kind":"contains_text","path":"SKILL.md","text":"Optional `.codex/rules/default.rules` proposal via `configure-codex`."},{"kind":"contains_text","path":"SKILL.md","text":"Never write sensitive agent/environment rules without explicit user confirmation."},{"kind":"contains_text","path":"SKILL.md","text":"Use `../zach-stack` for stack-specific decisions."}]}
diff --git a/evals/zach-stack/prompt_set.csv b/evals/zach-stack/prompt_set.csv
new file mode 100644
index 00000000..8756e00c
--- /dev/null
+++ b/evals/zach-stack/prompt_set.csv
@@ -0,0 +1,4 @@
+prompt_id,prompt
+choose_stack_defaults,"What stack defaults should we use for a new project so it stays testable and agent-friendly?"
+web_and_python_preferences,"Summarize your preferred web and Python tooling conventions for a repo."
+data_app_recommendation,"Recommend a stack for an analytics/data app with shared data and a lightweight UI."
diff --git a/evals/zach-stack/test.jsonl b/evals/zach-stack/test.jsonl
new file mode 100644
index 00000000..5da11889
--- /dev/null
+++ b/evals/zach-stack/test.jsonl
@@ -0,0 +1,3 @@
+{"case_id":"skill-structure","prompt_id":"choose_stack_defaults","skill":"zach-stack","checks":[{"kind":"file_exists","path":"SKILL.md"},{"kind":"file_exists","path":"agents/openai.yaml"},{"kind":"file_exists","path":"references/web.md"},{"kind":"file_exists","path":"references/python.md"},{"kind":"file_exists","path":"references/testing.md"},{"kind":"file_exists","path":"references/docs.md"},{"kind":"file_exists","path":"references/workspaces.md"},{"kind":"file_exists","path":"references/resources.md"},{"kind":"frontmatter_field_equals","path":"SKILL.md","field":"name","value":"zach-stack"},{"kind":"contains_text","path":"agents/openai.yaml","text":"$zach-stack"}]}
+{"case_id":"core-defaults-cover-key-technologies","prompt_id":"web_and_python_preferences","skill":"zach-stack","checks":[{"kind":"contains_all","path":"SKILL.md","texts":["Minimal web by default","Tailwind","use `uv` for package management and virtual environments.","prefer **Typer** for new CLIs; use **Click**","Playwright","prefer Streamlit + Plotly for analytics UI.","include `Justfile` in most repos","always define pre-commit via project-native tooling"]}]}
+{"case_id":"process-and-reference-surface","prompt_id":"data_app_recommendation","skill":"zach-stack","checks":[{"kind":"contains_all","path":"SKILL.md","texts":["Ask for project intent: web app, python service, data app, or mixed.","Confirm constraints that override defaults","`references/web.md`","`references/python.md`","`references/testing.md`","`references/docs.md`","`references/workspaces.md`","`references/resources.md`"]}]} 
diff --git a/justfile b/justfile
new file mode 100644
index 00000000..1b9a7ea9
--- /dev/null
+++ b/justfile
@@ -0,0 +1,26 @@
+default:
+  @just --list
+
+pre-commit:
+  uv run pre-commit install --install-hooks
+
+pre-commit-check:
+  uv run pre-commit run --all-files
+
+test:
+  uv run scripts/test-custom-skills.py
+
+sync-skills:
+  uv run scripts/sync-custom-skills.py sync
+
+check-skills:
+  uv run scripts/sync-custom-skills.py check
+
+checks:
+  uv run pre-commit run --all-files
+  uv run scripts/test-custom-skills.py
+  uv run scripts/run-skill-evals.py
+
+sync:
+  uv sync
+
diff --git a/pyproject.toml b/pyproject.toml
new file mode 100644
index 00000000..bd9d6903
--- /dev/null
+++ b/pyproject.toml
@@ -0,0 +1,42 @@
+[project]
+name = "skills"
+version = "0.0.0"
+description = "Personal tooling and skill-catalog support scripts for the skills repo."
+requires-python = ">=3.12"
+dependencies = [
+  "typer>=0.12",
+  "pre-commit>=3.7",
+  "ruff>=0.6",
+  "mypy>=1.10",
+]
+
+[tool.ruff]
+line-length = 100
+target-version = "py312"
+exclude = [
+  "skills/.curated",
+  "skills/.system",
+  "skills/.codex",
+  ".pre-commit-cache",
+]
+
+[tool.ruff.lint]
+select = ["E", "F", "I"]
+ignore = []
+
+[tool.mypy]
+python_version = "3.12"
+pretty = true
+show_error_codes = true
+warn_unused_configs = true
+disable_error_code = ["annotation-unchecked"]
+files = [
+  "scripts",
+]
+exclude = [
+  "skills/.curated",
+  "skills/.system",
+  "skills/.codex",
+  ".git",
+  ".venv",
+]
diff --git a/scripts/run-skill-evals.py b/scripts/run-skill-evals.py
new file mode 100755
index 00000000..405ef019
--- /dev/null
+++ b/scripts/run-skill-evals.py
@@ -0,0 +1,350 @@
+#!/usr/bin/env -S uv run
+# /// script
+# requires-python = ">=3.12"
+# dependencies = ["typer>=0.12"]
+# ///
+
+"""Run local skill eval suites from root `evals/` (eval-skills inspired layout)."""
+
+from __future__ import annotations
+
+import csv
+import json
+from pathlib import Path
+from typing import Any
+
+import typer
+
+REPO = Path(__file__).resolve().parents[1]
+CUSTOM_SKILLS_DIR = REPO / "skills" / ".custom"
+DEFAULT_EVAL_DIR = REPO / "evals"
+
+app = typer.Typer(help="Run root `evals/` suites against `.custom` skills.")
+
+
+def parse_frontmatter(text: str) -> dict[str, str]:
+    if not text.startswith("---\n"):
+        return {}
+    parts = text.split("---", 2)
+    if len(parts) < 3:
+        return {}
+    _, raw_fm, _ = parts
+    result: dict[str, str] = {}
+    for line in raw_fm.splitlines():
+        if ":" not in line:
+            continue
+        key, value = line.split(":", 1)
+        result[key.strip()] = value.strip().strip('"')
+    return result
+
+
+def _read_text_cached(
+    cache: dict[Path, str],
+    skill_dir: Path,
+    rel_path: str,
+) -> tuple[Path, str | None]:
+    target = skill_dir / rel_path
+    if target in cache:
+        return target, cache[target]
+    if not target.exists() or not target.is_file():
+        return target, None
+    content = target.read_text()
+    cache[target] = content
+    return target, content
+
+
+def run_check(
+    *,
+    suite_name: str,
+    case_id: str,
+    skill_name: str,
+    skill_dir: Path,
+    check: dict[str, Any],
+    text_cache: dict[Path, str],
+) -> tuple[int, list[str]]:
+    kind = str(check.get("kind", "")).strip()
+    passed = 0
+    failures: list[str] = []
+    label = f"{suite_name}/{case_id}"
+
+    if kind == "file_exists":
+        rel_path = str(check.get("path", "")).strip()
+        target = skill_dir / rel_path
+        if rel_path and target.exists():
+            return 1, []
+        failures.append(f"{label}: {skill_name} missing file {rel_path or '<unset>'}")
+        return 0, failures
+
+    if kind == "contains_text":
+        rel_path = str(check.get("path", "SKILL.md")).strip()
+        needle = str(check.get("text", ""))
+        target, content = _read_text_cached(text_cache, skill_dir, rel_path)
+        if content is None:
+            failures.append(f"{label}: {skill_name} missing file {target.relative_to(REPO)}")
+            return 0, failures
+        if needle and needle in content:
+            return 1, []
+        failures.append(f"{label}: {skill_name} missing text {needle!r} in {rel_path}")
+        return 0, failures
+
+    if kind == "contains_all":
+        rel_path = str(check.get("path", "SKILL.md")).strip()
+        texts_raw = check.get("texts", [])
+        texts = [str(item) for item in texts_raw] if isinstance(texts_raw, list) else []
+        target, content = _read_text_cached(text_cache, skill_dir, rel_path)
+        if content is None:
+            failures.append(f"{label}: {skill_name} missing file {target.relative_to(REPO)}")
+            return 0, failures
+        if not texts:
+            failures.append(f"{label}: {skill_name} contains_all check has no texts")
+            return 0, failures
+        missing = [needle for needle in texts if needle not in content]
+        if not missing:
+            return 1, []
+        failures.append(
+            f"{label}: {skill_name} missing {len(missing)} expected text(s) in {rel_path}: "
+            + ", ".join(repr(item) for item in missing)
+        )
+        return 0, failures
+
+    if kind == "frontmatter_field_equals":
+        rel_path = str(check.get("path", "SKILL.md")).strip()
+        field = str(check.get("field", "")).strip()
+        expected = str(check.get("value", ""))
+        target, content = _read_text_cached(text_cache, skill_dir, rel_path)
+        if content is None:
+            failures.append(f"{label}: {skill_name} missing file {target.relative_to(REPO)}")
+            return 0, failures
+        frontmatter = parse_frontmatter(content)
+        actual = frontmatter.get(field)
+        if field and actual == expected:
+            return 1, []
+        failures.append(
+            f"{label}: {skill_name} frontmatter {field!r} expected {expected!r}, got {actual!r}"
+        )
+        return 0, failures
+
+    failures.append(f"{label}: {skill_name} unknown check type {kind!r}")
+    return passed, failures
+
+
+def load_prompt_set(path: Path) -> dict[str, dict[str, str]]:
+    with path.open(newline="") as handle:
+        reader = csv.DictReader(handle)
+        fieldnames = set(reader.fieldnames or [])
+        required = {"prompt_id", "prompt"}
+        missing_headers = sorted(required - fieldnames)
+        if missing_headers:
+            raise SystemExit(
+                f"FAIL: {path.relative_to(REPO)} missing CSV headers: {', '.join(missing_headers)}"
+            )
+
+        prompts: dict[str, dict[str, str]] = {}
+        for index, row in enumerate(reader, start=2):
+            prompt_id = (row.get("prompt_id") or "").strip()
+            prompt = (row.get("prompt") or "").strip()
+            if not prompt_id:
+                raise SystemExit(f"FAIL: {path.relative_to(REPO)} row {index} missing prompt_id")
+            if not prompt:
+                raise SystemExit(f"FAIL: {path.relative_to(REPO)} row {index} missing prompt")
+            if prompt_id in prompts:
+                raise SystemExit(
+                    f"FAIL: {path.relative_to(REPO)} duplicate prompt_id {prompt_id!r}"
+                )
+            prompts[prompt_id] = {k: (v or "") for k, v in row.items()}
+        return prompts
+
+
+def load_test_cases(path: Path) -> list[dict[str, Any]]:
+    cases: list[dict[str, Any]] = []
+    for index, raw_line in enumerate(path.read_text().splitlines(), start=1):
+        line = raw_line.strip()
+        if not line:
+            continue
+        try:
+            data = json.loads(line)
+        except json.JSONDecodeError as exc:
+            raise SystemExit(
+                f"FAIL: {path.relative_to(REPO)} line {index}: invalid JSON ({exc})"
+            ) from exc
+        if not isinstance(data, dict):
+            raise SystemExit(f"FAIL: {path.relative_to(REPO)} line {index}: expected JSON object")
+        cases.append(data)
+    if not cases:
+        raise SystemExit(f"FAIL: {path.relative_to(REPO)} has no test cases")
+    return cases
+
+
+def run_suite(suite_dir: Path) -> dict[str, Any]:
+    suite_name = suite_dir.name
+    prompt_set_path = suite_dir / "prompt_set.csv"
+    test_path = suite_dir / "test.jsonl"
+    failures: list[str] = []
+    case_results: list[dict[str, Any]] = []
+    total_checks = 0
+    passed_checks = 0
+
+    if not prompt_set_path.exists():
+        return {
+            "suite": suite_name,
+            "status": "FAIL",
+            "prompts": 0,
+            "cases": 0,
+            "passed_checks": 0,
+            "total_checks": 0,
+            "failures": [f"{suite_name}: missing {prompt_set_path.relative_to(REPO)}"],
+            "case_results": [],
+        }
+    if not test_path.exists():
+        return {
+            "suite": suite_name,
+            "status": "FAIL",
+            "prompts": 0,
+            "cases": 0,
+            "passed_checks": 0,
+            "total_checks": 0,
+            "failures": [f"{suite_name}: missing {test_path.relative_to(REPO)}"],
+            "case_results": [],
+        }
+
+    prompts = load_prompt_set(prompt_set_path)
+    cases = load_test_cases(test_path)
+    text_cache: dict[Path, str] = {}
+
+    for case in cases:
+        case_id = str(case.get("case_id", "")).strip()
+        prompt_id = str(case.get("prompt_id", "")).strip()
+        skill_name = str(case.get("skill", suite_name)).strip()
+        checks_raw = case.get("checks", [])
+        checks = (
+            [item for item in checks_raw if isinstance(item, dict)]
+            if isinstance(checks_raw, list)
+            else []
+        )
+
+        case_failures: list[str] = []
+        case_passed = 0
+
+        if not case_id:
+            case_failures.append(f"{suite_name}: case missing case_id")
+        if not prompt_id:
+            case_failures.append(
+                f"{suite_name}/{case_id or '<missing-case-id>'}: missing prompt_id"
+            )
+        elif prompt_id not in prompts:
+            case_failures.append(f"{suite_name}/{case_id}: unknown prompt_id {prompt_id!r}")
+
+        skill_dir = CUSTOM_SKILLS_DIR / skill_name
+        if not skill_name:
+            case_failures.append(
+                f"{suite_name}/{case_id or '<missing-case-id>'}: missing skill name"
+            )
+        elif not skill_dir.is_dir():
+            case_failures.append(
+                f"{suite_name}/{case_id}: missing skill directory {skill_dir.relative_to(REPO)}"
+            )
+
+        if not checks:
+            case_failures.append(
+                f"{suite_name}/{case_id or '<missing-case-id>'}: case has no checks"
+            )
+
+        if not case_failures and skill_name:
+            for check in checks:
+                passed, check_failures = run_check(
+                    suite_name=suite_name,
+                    case_id=case_id,
+                    skill_name=skill_name,
+                    skill_dir=skill_dir,
+                    check=check,
+                    text_cache=text_cache,
+                )
+                total_checks += 1
+                passed_checks += passed
+                case_passed += passed
+                case_failures.extend(check_failures)
+        else:
+            total_checks += len(checks)
+
+        case_status = "PASS" if not case_failures else "FAIL"
+        failures.extend(case_failures)
+        case_results.append(
+            {
+                "case_id": case_id,
+                "prompt_id": prompt_id,
+                "skill": skill_name,
+                "status": case_status,
+                "passed_checks": case_passed,
+                "total_checks": len(checks),
+                "failures": case_failures,
+            }
+        )
+
+    return {
+        "suite": suite_name,
+        "status": "PASS" if not failures else "FAIL",
+        "prompts": len(prompts),
+        "cases": len(cases),
+        "passed_checks": passed_checks,
+        "total_checks": total_checks,
+        "failures": failures,
+        "case_results": case_results,
+    }
+
+
+def run_evals(eval_dir: Path) -> int:
+    if not eval_dir.exists():
+        print(f"FAIL: no evals directory found: {eval_dir}")
+        return 1
+    if not eval_dir.is_dir():
+        print(f"FAIL: eval path is not a directory: {eval_dir}")
+        return 1
+
+    suite_dirs = [
+        path
+        for path in sorted(eval_dir.iterdir())
+        if path.is_dir() and not path.name.startswith(".")
+    ]
+    if not suite_dirs:
+        print(f"FAIL: no eval suites found in {eval_dir}")
+        return 1
+
+    results = [run_suite(suite_dir) for suite_dir in suite_dirs]
+    print(json.dumps(results, indent=2))
+
+    failed = [result for result in results if result["status"] == "FAIL"]
+    if failed:
+        for suite in failed:
+            suite_name = str(suite.get("suite"))
+            suite_failures = suite.get("failures", [])
+            if isinstance(suite_failures, list):
+                for message in suite_failures:
+                    print(f"FAIL {suite_name} :: {message}")
+            else:
+                print(f"FAIL {suite_name} :: {suite_failures}")
+        return 1
+
+    total_suites = len(results)
+    total_cases = sum(int(item.get("cases", 0)) for item in results)
+    total_checks = sum(int(item.get("total_checks", 0)) for item in results)
+    print(
+        "PASS: all skill evals passed "
+        f"({total_suites} suites, {total_cases} cases, {total_checks} checks)"
+    )
+    return 0
+
+
+@app.callback(invoke_without_command=True)
+def main(
+    eval_dir: Path = typer.Option(
+        DEFAULT_EVAL_DIR,
+        "--eval-dir",
+        help="Path to root eval suites directory.",
+    ),
+) -> None:
+    """Run root eval suites against `.custom` skills."""
+    raise typer.Exit(code=run_evals(eval_dir))
+
+
+if __name__ == "__main__":
+    app()
diff --git a/scripts/sync-custom-skills.py b/scripts/sync-custom-skills.py
new file mode 100755
index 00000000..e831c970
--- /dev/null
+++ b/scripts/sync-custom-skills.py
@@ -0,0 +1,193 @@
+#!/usr/bin/env -S uv run
+# /// script
+# requires-python = ">=3.12"
+# dependencies = ["typer>=0.12"]
+# ///
+
+"""Compile and verify `.custom` skills vs `.codex/skills` mirror."""
+
+from __future__ import annotations
+
+import shutil
+from pathlib import Path
+
+import typer
+
+REPO_ROOT = Path(__file__).resolve().parents[1]
+DEFAULT_CUSTOM_ROOT = REPO_ROOT / "skills" / ".custom"
+DEFAULT_MIRROR_ROOT = REPO_ROOT / ".codex" / "skills"
+
+app = typer.Typer(help="Compile and verify .custom skills mirror.")
+
+
+def _resolve(path_like: str | Path) -> Path:
+    value = Path(path_like)
+    return value if value.is_absolute() else (REPO_ROOT / value).resolve()
+
+
+def sync_skills(custom_root: Path, mirror_root: Path, dry_run: bool = False) -> list[str]:
+    if not custom_root.is_dir():
+        raise SystemExit(f"FAIL: custom skills root not found: {custom_root}")
+
+    if dry_run:
+        return [
+            skill_dir.name
+            for skill_dir in sorted(custom_root.iterdir())
+            if (
+                skill_dir.is_dir()
+                and not skill_dir.name.startswith(".")
+                and (skill_dir / "SKILL.md").is_file()
+            )
+        ]
+
+    mirror_root.mkdir(parents=True, exist_ok=True)
+
+    # Clear any prior .custom marker in mirror root.
+    legacy_marker = mirror_root / ".custom"
+    if legacy_marker.is_symlink() or legacy_marker.exists():
+        if legacy_marker.is_dir() and not legacy_marker.is_symlink():
+            shutil.rmtree(legacy_marker)
+        else:
+            legacy_marker.unlink()
+
+    expected: set[str] = set()
+
+    for skill_dir in sorted(custom_root.iterdir()):
+        if not skill_dir.is_dir():
+            continue
+        if not (skill_dir / "SKILL.md").is_file():
+            continue
+
+        skill_name = skill_dir.name
+        expected.add(skill_name)
+        target = mirror_root / skill_name
+
+        if target.exists():
+            if target.is_dir():
+                shutil.rmtree(target)
+            else:
+                target.unlink()
+        shutil.copytree(skill_dir, target)
+
+    for entry in sorted(mirror_root.iterdir()):
+        if not entry.is_dir():
+            continue
+        if not entry.name.startswith(".") and entry.name not in expected:
+            shutil.rmtree(entry)
+
+    return sorted(expected)
+
+
+def list_skill_dirs(root: Path) -> dict[str, set[tuple[str, ...]]]:
+    skills: dict[str, set[tuple[str, ...]]] = {}
+    if not root.exists():
+        return skills
+
+    for path in sorted(root.iterdir()):
+        if not path.is_dir():
+            continue
+        if not (path / "SKILL.md").is_file():
+            continue
+        files = {tuple(p.relative_to(path).parts) for p in path.rglob("*") if p.is_file()}
+        skills[path.name] = files
+    return skills
+
+
+def check_skills(custom_root: Path, mirror_root: Path) -> int:
+    custom_skills = list_skill_dirs(custom_root)
+    mirror_skills = list_skill_dirs(mirror_root)
+
+    custom_names = set(custom_skills)
+    mirror_names = set(mirror_skills)
+
+    if custom_names != mirror_names:
+        missing = custom_names - mirror_names
+        extra = mirror_names - custom_names
+        if missing:
+            raise SystemExit(
+                f"FAIL: missing mirrored skills in .codex/skills: {', '.join(sorted(missing))}"
+            )
+        if extra:
+            raise SystemExit(
+                f"FAIL: unexpected extra skills in .codex/skills: {', '.join(sorted(extra))}"
+            )
+
+    for name in sorted(custom_names):
+        if custom_skills[name] != mirror_skills.get(name, set()):
+            raise SystemExit(f"FAIL: mirroring mismatch for skill '{name}'")
+
+    print("PASS: .custom and .codex/skills are mirrored")
+    return 0
+
+
+def _run_sync(custom_root: str, mirror_root: str, dry_run: bool) -> None:
+    custom_root_path = _resolve(custom_root)
+    mirror_root_path = _resolve(mirror_root)
+    skills = sync_skills(custom_root_path, mirror_root_path, dry_run=dry_run)
+    if dry_run:
+        print(f"dry-run: scanning {custom_root_path} -> {mirror_root_path}")
+        for skill in skills:
+            print(f"would sync: {skill}")
+        return
+
+    for skill in skills:
+        print(f"synced: {Path('.codex/skills') / skill}")
+
+
+def _run_check(custom_root: str, mirror_root: str) -> None:
+    custom_root_path = _resolve(custom_root)
+    mirror_root_path = _resolve(mirror_root)
+    check_skills(custom_root_path, mirror_root_path)
+
+
+@app.command("sync")
+def sync(
+    custom_root: str = typer.Option(
+        str(DEFAULT_CUSTOM_ROOT),
+        "--custom-root",
+        help="Source directory for custom skills.",
+    ),
+    mirror_root: str = typer.Option(
+        str(DEFAULT_MIRROR_ROOT),
+        "--mirror-root",
+        help="Target directory for mirrored skills.",
+    ),
+    dry_run: bool = typer.Option(
+        False,
+        "--dry-run",
+        help="Show planned sync updates without writing files.",
+    ),
+) -> None:
+    """Copy `.custom` skills into `.codex/skills`."""
+    _run_sync(custom_root=custom_root, mirror_root=mirror_root, dry_run=dry_run)
+
+
+@app.command("check")
+def check(
+    custom_root: str = typer.Option(
+        str(DEFAULT_CUSTOM_ROOT),
+        "--custom-root",
+        help="Source directory for custom skills.",
+    ),
+    mirror_root: str = typer.Option(
+        str(DEFAULT_MIRROR_ROOT),
+        "--mirror-root",
+        help="Target directory for mirrored skills.",
+    ),
+) -> None:
+    """Verify mirrored tree matches `.custom` exactly."""
+    _run_check(custom_root=custom_root, mirror_root=mirror_root)
+
+
+@app.callback(invoke_without_command=True)
+def _default(ctx: typer.Context) -> None:
+    if ctx.invoked_subcommand is None:
+        sync(
+            custom_root=str(DEFAULT_CUSTOM_ROOT),
+            mirror_root=str(DEFAULT_MIRROR_ROOT),
+            dry_run=False,
+        )
+
+
+if __name__ == "__main__":
+    app()
diff --git a/scripts/test-custom-skills.py b/scripts/test-custom-skills.py
new file mode 100755
index 00000000..96646540
--- /dev/null
+++ b/scripts/test-custom-skills.py
@@ -0,0 +1,49 @@
+#!/usr/bin/env -S uv run
+# /// script
+# requires-python = ">=3.12"
+# dependencies = ["typer>=0.12"]
+# ///
+
+"""Run all custom-skill lint/validation checks."""
+
+from __future__ import annotations
+
+import subprocess
+from pathlib import Path
+
+import typer
+
+ROOT = Path(__file__).resolve().parents[1]
+app = typer.Typer(help="Run the custom-skill lint/eval pipeline.")
+
+
+def run_command(command: list[str]) -> None:
+    result = subprocess.run(
+        command,
+        cwd=ROOT,
+        check=False,
+    )
+    if result.returncode != 0:
+        raise SystemExit(result.returncode)
+
+
+def run_pipeline() -> int:
+    print(">=> lint: validate custom skill structure and markdown style")
+    run_command(["uv", "run", "scripts/validate-custom-skills.py"])
+
+    print(">=> sync+check: sync .custom skills and verify mirror")
+    run_command(["uv", "run", "scripts/sync-custom-skills.py", "sync"])
+    run_command(["uv", "run", "scripts/sync-custom-skills.py", "check"])
+
+    print("PASS: custom skill lint/tests complete")
+    return 0
+
+
+@app.callback(invoke_without_command=True)
+def main() -> None:
+    """Run validation + sync/check pipeline."""
+    raise typer.Exit(code=run_pipeline())
+
+
+if __name__ == "__main__":
+    app()
diff --git a/scripts/validate-custom-skills.py b/scripts/validate-custom-skills.py
new file mode 100755
index 00000000..e44459a4
--- /dev/null
+++ b/scripts/validate-custom-skills.py
@@ -0,0 +1,205 @@
+#!/usr/bin/env -S uv run
+# /// script
+# requires-python = ">=3.12"
+# dependencies = ["typer>=0.12"]
+# ///
+
+"""Validation and lightweight lint checks for `.custom` skills."""
+
+from __future__ import annotations
+
+import re
+from pathlib import Path
+
+import typer
+
+REPO_ROOT = Path(__file__).resolve().parents[1]
+CUSTOM_ROOT = REPO_ROOT / "skills" / ".custom"
+
+REQUIRED_SKILLS = {
+    "zach-stack": {
+        "references": {
+            "web.md",
+            "python.md",
+            "testing.md",
+            "docs.md",
+            "workspaces.md",
+            "resources.md",
+        }
+    },
+    "init-repo": {
+        "references": {
+            "new-repo-runbook.md",
+        }
+    },
+    "agentify-repo": {
+        "references": {
+            "incremental-harness.md",
+            "convergence-phases.md",
+            "rollback-and-safety.md",
+        }
+    },
+    "configure-codex": {
+        "references": {
+            "rules-default.md",
+            "allowed-commands-matrix.md",
+            "codex-environment.md",
+        }
+    },
+}
+
+SKILL_NAME_RE = re.compile(r"^[a-z0-9]+(?:-[a-z0-9]+)*$")
+
+
+def fail(message: str, *, file: Path | None = None) -> None:
+    if file:
+        print(f"FAIL: {file}: {message}")
+    else:
+        print(f"FAIL: {message}")
+    raise SystemExit(1)
+
+
+def check_markdown_lint(path: Path) -> None:
+    content = path.read_text()
+    if not content.endswith("\n"):
+        fail("does not end with newline", file=path)
+    if "\t" in content:
+        fail("contains tabs", file=path)
+
+    if path.name == "SKILL.md":
+        if not content.startswith("---\n"):
+            fail("missing YAML frontmatter start", file=path)
+        parts = content.split("---", 2)
+        if len(parts) < 3:
+            fail("missing YAML frontmatter end marker", file=path)
+        if not re.search(r"^# ", content, re.M):
+            fail("missing top-level markdown heading", file=path)
+
+
+app = typer.Typer(help="Validate skill definitions in skills/.custom.")
+
+
+def parse_frontmatter(lines: list[str]) -> dict[str, str]:
+    fm: dict[str, str] = {}
+    for line in lines:
+        if not line.strip():
+            continue
+        if ":" not in line:
+            continue
+        key, value = line.split(":", 1)
+        fm[key.strip()] = value.strip().strip('"')
+    return fm
+
+
+def validate_frontmatter(skill_dir: Path) -> str:
+    skill_path = skill_dir / "SKILL.md"
+    if not skill_path.exists():
+        fail("missing SKILL.md", file=skill_dir)
+
+    content = skill_path.read_text()
+    check_markdown_lint(skill_path)
+
+    if not content.startswith("---\n"):
+        fail("SKILL.md must start with YAML frontmatter", file=skill_path)
+    try:
+        _, raw_fm, _ = content.split("---", 2)
+    except ValueError as exc:
+        fail("invalid frontmatter block", file=skill_path)
+        raise SystemExit from exc
+
+    fm = parse_frontmatter(raw_fm.splitlines())
+    if "name" not in fm or "description" not in fm:
+        fail("missing required frontmatter keys: name, description", file=skill_path)
+
+    name = fm["name"].strip()
+    if not SKILL_NAME_RE.match(name):
+        fail(
+            f"invalid skill name '{name}' in frontmatter; expected lower-case hyphen name",
+            file=skill_path,
+        )
+
+    if name != skill_dir.name:
+        fail(f"frontmatter name '{name}' must match directory '{skill_dir.name}'", file=skill_path)
+
+    description = fm["description"].strip()
+    if len(description) > 1024:
+        fail("description exceeds 1024 chars", file=skill_path)
+    if "<" in description or ">" in description:
+        fail("description contains angle brackets", file=skill_path)
+
+    for token in re.findall(r"\(references/([^)]*\.md)\)", content):
+        ref_path = skill_dir / "references" / token
+        if not ref_path.exists():
+            fail(f"references/{token} link does not exist", file=skill_path)
+
+    return name
+
+
+def validate_agents_config(skill_dir: Path, name: str) -> None:
+    agent_cfg = skill_dir / "agents" / "openai.yaml"
+    if not agent_cfg.exists():
+        return
+    content = agent_cfg.read_text()
+    if not content.startswith("interface:"):
+        fail("agents/openai.yaml missing interface block", file=agent_cfg)
+    if "display_name:" not in content:
+        fail("agents/openai.yaml missing display_name", file=agent_cfg)
+    if "default_prompt:" not in content:
+        fail("agents/openai.yaml missing default_prompt", file=agent_cfg)
+    if f"${name}" not in content:
+        fail(f"agents/openai.yaml default_prompt should mention ${name}", file=agent_cfg)
+
+
+def validate_references(skill_dir: Path, required: set[str]) -> None:
+    refs_dir = skill_dir / "references"
+    if not refs_dir.exists():
+        if required:
+            fail("missing references directory", file=skill_dir)
+        return
+
+    actual = {p.name for p in refs_dir.glob("*.md") if p.is_file()}
+    missing = required - actual
+    if missing:
+        missing_str = ", ".join(sorted(missing))
+        fail(f"missing required references: {missing_str}", file=skill_dir / "references")
+
+    for p in refs_dir.glob("*.md"):
+        check_markdown_lint(p)
+
+
+def run_validation(custom_root: Path = CUSTOM_ROOT) -> int:
+    if not custom_root.exists():
+        fail(".custom directory does not exist at skills/.custom")
+
+    if not (custom_root / "AGENTS.md").exists():
+        fail("missing .custom/AGENTS.md")
+
+    custom_skills = [
+        p
+        for p in sorted(custom_root.iterdir())
+        if p.is_dir() and not p.name.startswith(".") and (p / "SKILL.md").exists()
+    ]
+
+    for skill_dir in custom_skills:
+        name = validate_frontmatter(skill_dir)
+
+        required = REQUIRED_SKILLS.get(name, {}).get("references", set())
+        validate_references(skill_dir, set(required))
+        validate_agents_config(skill_dir, name)
+
+    print("PASS: custom skills lint and structure checks")
+    return 0
+
+
+@app.callback(invoke_without_command=True)
+def main(
+    custom_root: Path = typer.Option(
+        CUSTOM_ROOT, "--custom-root", "-c", help="Path to .custom skills directory."
+    ),
+) -> None:
+    """Run `.custom` skill validation."""
+    raise typer.Exit(code=run_validation(custom_root))
+
+
+if __name__ == "__main__":
+    app()
diff --git a/skills/.custom/AGENTS.md b/skills/.custom/AGENTS.md
new file mode 100644
index 00000000..0f4a1ff5
--- /dev/null
+++ b/skills/.custom/AGENTS.md
@@ -0,0 +1,8 @@
+# .custom Agent Instructions
+
+This directory contains personal/custom skills used for repo-specific agent workflows.
+
+- Keep skill definitions opinionated and minimal in `SKILL.md`.
+- Put detailed instructions in `references/` files under each skill.
+- Maintain one-to-one mirroring between `.custom/<skill>` and `.codex/skills/<skill>` via sync tooling.
+- Run `bash scripts/test-custom-skills.sh` before committing `.custom` updates.
diff --git a/skills/.custom/agentify-repo/SKILL.md b/skills/.custom/agentify-repo/SKILL.md
new file mode 100644
index 00000000..72c3e571
--- /dev/null
+++ b/skills/.custom/agentify-repo/SKILL.md
@@ -0,0 +1,42 @@
+---
+name: agentify-repo
+description: "Incrementally add harness and tooling to an existing repo so it converges toward zach-stack safely over multiple passes."
+---
+
+# Agentify Repo
+
+Use this skill when asked to make an existing repo more agent-friendly without one-shot rewrites.
+
+## Core goal
+
+If required dependencies are not installed in the current environment, bootstrap them first:
+
+- `$install-skills https://github.com/openai/skills/tree/main/skills/.custom/zach-stack`
+- `$install-skills https://github.com/openai/skills/tree/main/skills/.custom/configure-codex`
+
+Set up harness/tooling in small, reversible steps that make the repo more verifiable and easier for agents to work with.
+
+## Recommended flow
+
+1. Baseline assessment: detect current stack, docs state, tests, lints, and CI.
+2. Harness setup phase: add/update only low-risk structure first (`docs/`, `Justfile`, command discoverability, test map).
+3. Apply `zach-stack`-aligned improvements in small batches:
+   - tooling defaults relevant to current stack
+   - testing additions by priority
+   - docs upkeep and file ownership mapping
+4. Validate each phase.
+5. Pause with explicit next milestone.
+
+## Hard rules
+
+- No broad migration in one run unless explicitly authorized.
+- Prefer additive changes and stable commit points.
+- If unknown/legacy constraints exist, defer and document them instead of forcing defaults.
+- Ask before any environment or rules-file changes that require trust-sensitive decisions.
+
+## References
+
+- `references/incremental-harness.md`
+- `references/convergence-phases.md`
+- `references/rollback-and-safety.md`
+- `../zach-stack` for target conventions.
diff --git a/skills/.custom/agentify-repo/agents/openai.yaml b/skills/.custom/agentify-repo/agents/openai.yaml
new file mode 100644
index 00000000..c76ca4e4
--- /dev/null
+++ b/skills/.custom/agentify-repo/agents/openai.yaml
@@ -0,0 +1,4 @@
+interface:
+  display_name: "Agentify Repo"
+  short_description: "Incrementally harden existing repos with zach-stack conventions."
+  default_prompt: "Use $agentify-repo to add agent-friendly tooling in safe milestones."
diff --git a/skills/.custom/agentify-repo/references/convergence-phases.md b/skills/.custom/agentify-repo/references/convergence-phases.md
new file mode 100644
index 00000000..78a4ae3f
--- /dev/null
+++ b/skills/.custom/agentify-repo/references/convergence-phases.md
@@ -0,0 +1,19 @@
+# Convergence phases
+
+## Phase 0: Discovery
+
+- Detect existing stack and constraints.
+- Record what cannot be changed safely in one pass.
+
+## Phase 1: Surface hardening
+
+- Docs + Justfile + lightweight test discoverability.
+- Add project-specific lint/test quick checks.
+
+## Phase 2: Toolchain alignment
+
+- Add `zach-stack` defaults where they do not disrupt current architecture.
+
+## Phase 3+: Optional deepening
+
+- Introduce additional stack pieces (workspaces, visualization layout, docs automation, etc.) as explicit follow-up passes.
diff --git a/skills/.custom/agentify-repo/references/incremental-harness.md b/skills/.custom/agentify-repo/references/incremental-harness.md
new file mode 100644
index 00000000..1ec9b7c1
--- /dev/null
+++ b/skills/.custom/agentify-repo/references/incremental-harness.md
@@ -0,0 +1,16 @@
+# Incremental harness setup
+
+## Purpose
+
+Build the operating surface needed for agents before enforcing deeper stack shifts.
+
+## Initial changes (safe first)
+
+- Add/normalize `docs/` with a current file-map and runbook.
+- Add/refresh `Justfile` command palette.
+- Introduce a lightweight test index and smoke test list.
+- Clarify command/tool ownership in docs.
+
+## Principle
+
+The harness layer should reduce uncertainty first: if agents can discover and run stable commands, deeper changes are cheaper and safer.
diff --git a/skills/.custom/agentify-repo/references/rollback-and-safety.md b/skills/.custom/agentify-repo/references/rollback-and-safety.md
new file mode 100644
index 00000000..ce23b55b
--- /dev/null
+++ b/skills/.custom/agentify-repo/references/rollback-and-safety.md
@@ -0,0 +1,20 @@
+# Rollback and safety
+
+## Why it matters
+
+Incremental changes are useful only if each step is reversible.
+
+## Safety pattern
+
+- Make one conceptual category of change at a time.
+- Validate commands and tests after each change set.
+- Record a simple checkpoint note:
+  - What changed
+  - Why it changed
+  - How to revert
+
+## Example rollback triggers
+
+- Unexpected behavioral diff
+- Test coverage mismatch introduced by command changes
+- Documentation or automation drift
diff --git a/skills/.custom/configure-codex/SKILL.md b/skills/.custom/configure-codex/SKILL.md
new file mode 100644
index 00000000..ec80204b
--- /dev/null
+++ b/skills/.custom/configure-codex/SKILL.md
@@ -0,0 +1,38 @@
+---
+name: configure-codex
+description: "Conservatively configure `.codex/rules/default.rules` and Codex environment setup for repo and user ergonomics."
+---
+
+# Configure Codex
+
+Use this skill when asked to update Codex rules, command permissions, or environment setup for repository work.
+
+## Scope
+- `.codex/rules/default.rules` updates.
+- Command allow-list selection.
+- Codex environment/worktree ergonomics.
+- Guidance for repo-scoped vs user-scoped settings.
+
+## Guarded workflow
+
+1. Inventory current constraints and user intent.
+2. Propose only relevant allowed command families (e.g., uv, just, pnpm, gh, glab).
+3. Ask for confirmation before writing rule updates.
+4. Apply minimally and explain impact.
+5. Validate the new command surface and leave a follow-up note.
+
+## Conservative defaults
+
+- Keep allow-lists minimal.
+- Prefer repo-only permissions over broad global overrides.
+- Add no commands that are not used by the project.
+
+## Troubleshooting
+
+- If `.codex/rules` is not writable in the current workspace, update the user-level `/Users/zach.parent/.codex/rules/default.rules` after confirming scope and keep that in notes.
+
+## References
+
+- `references/rules-default.md`
+- `references/allowed-commands-matrix.md`
+- `references/codex-environment.md`
diff --git a/skills/.custom/configure-codex/agents/openai.yaml b/skills/.custom/configure-codex/agents/openai.yaml
new file mode 100644
index 00000000..ffaf935d
--- /dev/null
+++ b/skills/.custom/configure-codex/agents/openai.yaml
@@ -0,0 +1,4 @@
+interface:
+  display_name: "Configure Codex"
+  short_description: "Set up codex rules and environment configuration safely."
+  default_prompt: "Use $configure-codex to propose and apply safe Codex configuration updates."
diff --git a/skills/.custom/configure-codex/references/allowed-commands-matrix.md b/skills/.custom/configure-codex/references/allowed-commands-matrix.md
new file mode 100644
index 00000000..a05fde93
--- /dev/null
+++ b/skills/.custom/configure-codex/references/allowed-commands-matrix.md
@@ -0,0 +1,17 @@
+# Allowed command matrix (`configure-codex`)
+
+## Always avoid by default
+
+- Blanket escalation of broad shell commands.
+- Universal global allow-lists without project need.
+
+## Recommended matrix by project type
+
+- **Web-first**: `pnpm`, `just`, `gh`, optional `uv`.
+- **Python-first**: `uv`, `just`, `gh`, optional `glab`.
+- **Mixed**: web + python commands only where actively used.
+
+## Confirmation requirements
+
+- Ask before enabling commands not currently used by the repo.
+- Keep user-visible logs of every newly enabled command.
diff --git a/skills/.custom/configure-codex/references/codex-environment.md b/skills/.custom/configure-codex/references/codex-environment.md
new file mode 100644
index 00000000..418065e9
--- /dev/null
+++ b/skills/.custom/configure-codex/references/codex-environment.md
@@ -0,0 +1,19 @@
+# Codex environment and worktree setup
+
+## Objective
+
+Make agent work predictable and repeatable in local and customer environments.
+
+## Setup areas
+
+- command presets for project startup
+- worktree naming and path strategy
+- reusable command sequences via `Justfile`
+- lightweight onboarding docs for Codex behavior
+
+## Recommendations
+
+- Keep environment setup documented in `docs/`.
+- Separate repo updates from user-profile updates.
+- Validate environment commands after each phase.
+- Use conservative defaults and escalate only as needed.
diff --git a/skills/.custom/configure-codex/references/rules-default.md b/skills/.custom/configure-codex/references/rules-default.md
new file mode 100644
index 00000000..ffdcd324
--- /dev/null
+++ b/skills/.custom/configure-codex/references/rules-default.md
@@ -0,0 +1,47 @@
+# `.codex/rules/default.rules` guidance
+
+## Principles
+
+- Keep permissions scoped to the project workflow.
+- Prefer minimal, explicit commands.
+- Ask before writing any potentially sensitive settings.
+
+## Typical command families
+
+- `uv`: Python install/test/runtime commands
+- `just`: repeated repo task orchestration
+- `pnpm`: node tooling for web apps
+- `gh`: GitHub workflows and issue/pr management
+- `glab`: GitLab/GLab workflow parity where used
+
+## Process
+
+- Propose a diff, confirm with user, then apply.
+- Re-check the rule set after each commit boundary.
+## Example `prefix_rule` syntax
+
+```python
+prefix_rule(
+    pattern = ["uv", "sync"],
+    decision = "allow",
+    justification = "Allow project dependency sync outside sandbox",
+    match = [
+        "uv sync",
+        "uv sync --locked",
+    ],
+    not_match = ["uv run sync"],
+)
+```
+
+Use `match` and `not_match` as inline rule tests so malformed patterns fail fast when the rule file is loaded.
+
+## Validate the rules file
+
+Run a rule check after updating `default.rules`:
+
+```bash
+codex execpolicy check --pretty --rules .codex/rules/default.rules -- uv sync
+```
+
+Use the same command for any command you changed in the allow list.
+
diff --git a/skills/.custom/init-repo/SKILL.md b/skills/.custom/init-repo/SKILL.md
new file mode 100644
index 00000000..612d19e1
--- /dev/null
+++ b/skills/.custom/init-repo/SKILL.md
@@ -0,0 +1,40 @@
+---
+name: init-repo
+description: "Initialize a new repo with a fast, testable, documented, agent-friendly setup using zach-stack defaults."
+---
+
+# Init Repo
+
+Use this skill when a user asks to start a new project or bootstrap an empty repository.
+
+## Workflow
+
+If required dependencies are missing in this environment, bootstrap them first:
+
+- `$install-skills https://github.com/openai/skills/tree/main/skills/.custom/zach-stack`
+- `$install-skills https://github.com/openai/skills/tree/main/skills/.custom/configure-codex`
+
+1. Capture constraints and ask clarifying questions only if ambiguous.
+2. Choose a stack profile: web, python, visualization, or mixed.
+3. Create a phase-1 scaffold that is minimal but complete:
+   - `docs/` with setup and file map starter.
+   - `Justfile` with repeatable agent commands.
+   - Testing skeleton (unit + at least one integration check).
+   - Linting/pre-commit baseline for selected stack.
+   - Optional `.codex/rules/default.rules` proposal via `configure-codex`.
+4. Add technology-specific defaults from `zach-stack`:
+   - web defaults (framework-light vs lightweight React)
+   - Python defaults (`uv`)
+   - workspace structure if mixed.
+5. Define the first milestone commit boundary.
+
+## Guardrails
+
+- Keep `init-repo` incremental: prefer Phase 1 completion over full build-out.
+- Default to minimal files and explain what is deferred.
+- Never write sensitive agent/environment rules without explicit user confirmation.
+
+## References
+
+- Use `references/new-repo-runbook.md` for scaffold templates and command defaults.
+- Use `../zach-stack` for stack-specific decisions.
diff --git a/skills/.custom/init-repo/agents/openai.yaml b/skills/.custom/init-repo/agents/openai.yaml
new file mode 100644
index 00000000..3aa15dd0
--- /dev/null
+++ b/skills/.custom/init-repo/agents/openai.yaml
@@ -0,0 +1,4 @@
+interface:
+  display_name: "Init Repo"
+  short_description: "Bootstrap a new repo with testable and agent-friendly defaults."
+  default_prompt: "Use $init-repo to scaffold a new repository with zach-stack conventions."
diff --git a/skills/.custom/init-repo/references/new-repo-runbook.md b/skills/.custom/init-repo/references/new-repo-runbook.md
new file mode 100644
index 00000000..d89c68c0
--- /dev/null
+++ b/skills/.custom/init-repo/references/new-repo-runbook.md
@@ -0,0 +1,21 @@
+# New repo runbook
+
+## Phase 1 scaffold (minimum)
+
+- Create `docs/` and add a compact onboarding file.
+- Add `Justfile` with build/test/lint commands.
+- Add dependency/tool defaults for selected stack (`pnpm` for web, `uv` for Python).
+- Add testing skeleton for targeted unit and integration coverage.
+- Add workspace/docs conventions in notes for future phases.
+
+## Recommended first tasks
+
+- Choose stack from `zach-stack` profiles.
+- Add contributor-level checklist for tests and docs updates.
+- Add a clean rollback point before changing environment/config files.
+
+## Suggested outputs by stack
+
+- Web: Tailwind baseline + lightweight project setup + test/check commands.
+- Python: `pyproject.toml`/`uv` convention + basic test command.
+- Mixed: two-phase plan with clear module boundaries and shared-data workspace notes.
diff --git a/skills/.custom/zach-stack/SKILL.md b/skills/.custom/zach-stack/SKILL.md
new file mode 100644
index 00000000..ca1398ab
--- /dev/null
+++ b/skills/.custom/zach-stack/SKILL.md
@@ -0,0 +1,58 @@
+---
+name: zach-stack
+description: "Define opinionated conventions for testable, well-documented, agent-friendly repos. Use for stack selection and application defaults."
+---
+
+# Zach-Stack
+
+Use this skill when asked to define or apply a preferred stack for a new/existing project.
+
+## Purpose
+
+`zach-stack` is the compact decision source for:
+- project scaffolding defaults
+- tooling conventions
+- test strategy expectations
+- docs/lifecycle defaults
+- Codex-friendly repository structure
+
+## When to use
+
+- before or during `init-repo`
+- during `agentify-repo` as the target conventions
+- when a team member asks for your preferred stack defaults
+
+## Core rules (high signal)
+
+- **Minimal web by default**: prefer plain HTML/CSS/JS when requirements are simple.
+- **Dynamic web**: choose a lightweight React setup when needed for stateful interactions.
+- **Complex static sites**: prefer Eleventy.
+- **CSS**: default to Tailwind.
+- **Python work**: use `uv` for package management and virtual environments.
+- **Workspaces**: prefer workspace-based organization for multi-module projects.
+- **CLI stack**: prefer **Typer** for new CLIs; use **Click** when existing codebases already use it.
+- **Testing**: add targeted unit tests and at least one integration/acceptance layer.
+- **Frontend checks**: include automated checks that cover real user workflows.
+- **Playwright path**: use Playwright CLI for exploration and flow debugging; use Playwright-driven E2E where applicable.
+- **Visualization**: prefer Streamlit + Plotly for analytics UI.
+- **Project shape for shared data**: use a dedicated workspace/module for data, plus workspace boundaries for Streamlit/compute when needed.
+- **Standalone scripts**: keep CLIs standalone with minimal dependencies and explicit script-level dependency boundaries; keep CLIs minimally scoped.
+- **Docs as source of truth**: every project must have `docs/` and keep it current with code changes.
+- **Automation**: include `Justfile` in most repos for repeatable agent tasks.
+- **Pre-commit**: always define pre-commit via project-native tooling (`pnpm` or `uv`).
+
+## Process
+
+1. Ask for project intent: web app, python service, data app, or mixed.
+2. Select a minimal stack from these preferences.
+3. Confirm constraints that override defaults (security, infra, legacy platform).
+4. Apply only what is relevant for the project phase.
+
+## References
+
+- `references/web.md` for web defaults, CSS, and Playwright use.
+- `references/python.md` for UV, workspace, and Python conventions.
+- `references/testing.md` for test structure expectations.
+- `references/docs.md` for living docs patterns.
+- `references/workspaces.md` for shared workspaces in mixed stacks.
+- `references/resources.md` for external source references.
diff --git a/skills/.custom/zach-stack/agents/openai.yaml b/skills/.custom/zach-stack/agents/openai.yaml
new file mode 100644
index 00000000..12336df6
--- /dev/null
+++ b/skills/.custom/zach-stack/agents/openai.yaml
@@ -0,0 +1,4 @@
+interface:
+  display_name: "Zach Stack"
+  short_description: "Opinionated stack defaults for agent-friendly repos."
+  default_prompt: "Use $zach-stack to define technology and workflow defaults for the repo."
diff --git a/skills/.custom/zach-stack/references/docs.md b/skills/.custom/zach-stack/references/docs.md
new file mode 100644
index 00000000..4479841d
--- /dev/null
+++ b/skills/.custom/zach-stack/references/docs.md
@@ -0,0 +1,19 @@
+# Documentation conventions (`zach-stack`)
+
+## Minimum
+
+- Every repo must include `docs/`.
+- Docs should include a file index/structure map and quick update points.
+- Keep docs updated as part of meaningful code changes.
+
+## Practical expectations
+
+- Maintain short-lived markdown docs that stay current with code.
+- Include architecture and setup notes in `docs/` for onboarding.
+- Keep one canonical source-of-truth for setup commands and developer workflows.
+- Add a short, versioned list of files and responsibility in `docs/file-map.md` (or equivalent).
+
+## Docs quality and checks
+
+- Use docs linting where practical to catch stale references.
+- Treat docs quality as part of completion criteria before considering a change done.
diff --git a/skills/.custom/zach-stack/references/python.md b/skills/.custom/zach-stack/references/python.md
new file mode 100644
index 00000000..3807a99e
--- /dev/null
+++ b/skills/.custom/zach-stack/references/python.md
@@ -0,0 +1,33 @@
+# Python conventions (`zach-stack`)
+
+## Scope
+Use for Python-heavy or mixed repos with Python services/modules.
+
+## Tooling defaults
+
+- Use `uv` for dependency/developer workflow.
+- Prefer workspace separation when there are multiple independent Python modules.
+- Use a dedicated `workspace` structure when teams need clean boundaries for CLI, service, library, and jobs.
+
+## CLI conventions
+
+- Prefer **Typer** for new CLI development.
+- Accept **Click** when existing codepaths or existing teams standardize on Click.
+- Keep CLI entrypoints near interfaces and minimize coupling to service internals.
+- Make scripts standalone where practical:
+  - put CLI dependency declarations in the nearest packaging boundary
+  - avoid importing large module stacks at module import time
+  - keep defaults explicit to reduce runtime surprises
+
+## App architecture recommendations
+
+- If data is consumed by both core services and visualization:
+  - create a separate data workspace/project for shared contracts and loaders
+  - create separate consumer workspaces (for example API layer, Streamlit app)
+- For data visualization: use Streamlit + Plotly.
+- If the project is small and one-purpose, keep one workspace and add explicit module boundaries.
+
+## Maintenance and tests
+
+- Keep unit tests near implementation modules.
+- Add integration tests for external boundaries (HTTP handlers, file contracts, job inputs).
diff --git a/skills/.custom/zach-stack/references/resources.md b/skills/.custom/zach-stack/references/resources.md
new file mode 100644
index 00000000..bbd5eacb
--- /dev/null
+++ b/skills/.custom/zach-stack/references/resources.md
@@ -0,0 +1,13 @@
+# External references for `zach-stack`
+
+- [Agent Skills homepage](https://agentskills.io/home)
+- [Agent Skills specification](https://agentskills.io/specification)
+- [What are Skills?](https://agentskills.io/what-are-skills)
+- [Harness engineering at OpenAI](https://openai.com/index/harness-engineering/)
+- [Testing Agent Skills with Evals](https://developers.openai.com/blog/eval-skills/)
+
+## Why these references are here
+
+- Keep SKILL files concise and point to standards-based context when needed.
+- Encourage incremental, low-friction automation.
+- Reinforce evaluation and quality checks for repeatable agent behavior.
diff --git a/skills/.custom/zach-stack/references/testing.md b/skills/.custom/zach-stack/references/testing.md
new file mode 100644
index 00000000..e716a44b
--- /dev/null
+++ b/skills/.custom/zach-stack/references/testing.md
@@ -0,0 +1,45 @@
+# Testing conventions (`zach-stack`)
+
+## CLI strategy defaults
+
+- **CLI frameworks**: prefer `Typer` for new CLI implementations.
+- **CLI alternatives**: `Click` is acceptable for existing or click-first codebases and when explicit subcommand ergonomics are required.
+- **Dependency hygiene**: keep CLI modules lightweight; make scripts as self-contained and dependency-bounded as possible by:
+  - placing entrypoints in dedicated files/modules
+  - scoping dependencies to the package/script boundary
+  - avoiding monolithic "utility" scripts with broad transitive imports
+
+## Test expectations by framework
+
+- Add focused unit tests for parsing, argument validation, and command routing.
+- Add integration-style tests for command side effects (filesystem, subprocess calls, exit codes).
+- For **Typer** CLIs:
+  - test commands with `click.testing.CliRunner` syntax (Typer uses Click internally)
+  - verify exit codes and output
+  - verify help text and global options
+- For **Click** CLIs:
+  - test via `click.testing.CliRunner`
+  - validate success and failure paths
+  - include edge-case tests around argument parsing and exit codes
+- For both, assert deterministic outputs where possible.
+
+## Frontend checks
+
+- For UI work, include interaction-level validation against real page behavior (manual Playwright flow check and automated checks where feasible).
+
+## Docs/test coupling
+
+- Every major behavior change should include an updated doc entry describing intent and validation command.
+- Avoid relying on broad integration tests only; use focused tests for failure isolation.
+
+## CLI command style for single-command scripts
+
+- For scripts intended to have a single action, prefer exposing the behavior on the default command and avoid a dedicated `run` subcommand label.
+- This keeps invocation simple for agents: `uv run scripts/<tool>.py`.
+
+## Examples
+
+- `uv run scripts/validate-custom-skills.py` (default entrypoint)
+- `uv run scripts/run-skill-evals.py`
+- `uv run scripts/test-custom-skills.py`
+- `uv run scripts/sync-custom-skill.py sync --dry-run`
diff --git a/skills/.custom/zach-stack/references/web.md b/skills/.custom/zach-stack/references/web.md
new file mode 100644
index 00000000..e7c7e814
--- /dev/null
+++ b/skills/.custom/zach-stack/references/web.md
@@ -0,0 +1,28 @@
+# Web conventions (`zach-stack`)
+
+## Scope
+Use when a project includes frontend code and needs a consistent, lightweight stack.
+
+## Conventions
+
+- Use lightweight, framework-free implementations for simple pages.
+- For dynamic client behavior, prefer lightweight React over heavy abstraction layers.
+- Use Tailwind for styling defaults.
+- For content-heavy or markdown-driven complex static sites, use Eleventy.
+- Use `pnpm` as package manager by default for web tooling.
+- Keep browser-facing code testable with at least:
+  - unit-level checks for pure functions/components (or equivalent)
+  - integration tests for user flows
+  - end-to-end checks for critical UI paths
+
+## Playwright and checks
+
+- For interactive UI exploration and triage, use Playwright CLI first.
+- For stable e2e coverage, standardize on Playwright-based automation in CI for key flows.
+- For Python-facing web UIs, include the Python Playwright stack where helpful.
+- Keep selectors and test semantics resilient to refactors.
+
+## Decision points
+
+- If no interactive state and no component orchestration are needed: no React.
+- If there are interactive widgets, state-driven forms, or realtime updates: use React.
diff --git a/skills/.custom/zach-stack/references/workspaces.md b/skills/.custom/zach-stack/references/workspaces.md
new file mode 100644
index 00000000..554254eb
--- /dev/null
+++ b/skills/.custom/zach-stack/references/workspaces.md
@@ -0,0 +1,12 @@
+# Workspace conventions (`zach-stack`)
+
+## Rationale
+
+Use workspaces to separate concerns, reduce coupling, and support agent navigation.
+
+## Typical patterns
+
+- `workspace` for source code organization when multiple modules are expected.
+- Separate project for shared data access layer if data feeds multiple components.
+- Separate Streamlit app workspace for visualization and UX.
+- Keep dependency graphs explicit and directional (core < data < apps).
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