diff --git a/docs/source/conf.py b/docs/source/conf.py index 16fd88a..0566712 100644 --- a/docs/source/conf.py +++ b/docs/source/conf.py @@ -57,3 +57,6 @@ html_static_path = ['_static'] html_css_files = ['conf.css'] +# load mathjax so render math in 'HTML-CSS' which is searchable in browser +mathjax_path = "https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML" + diff --git a/docs/source/intro.rst b/docs/source/intro.rst index 8c1f540..baed59d 100644 --- a/docs/source/intro.rst +++ b/docs/source/intro.rst @@ -622,7 +622,7 @@ nanophytoplankton: Z = \psi \cdot p_{phy} \cdot \mathrm{C}_{phy} -$\psi$ is the calcite production ratio that incorporates the ratio of +:math:`\psi` is the calcite production ratio that incorporates the ratio of calcium carbonate producers to total nanophytoplankton and the :math:`CaCO_3`:POC ratio in coccolithophorids. The latter is assumed to be 1. @@ -829,7 +829,7 @@ The silica dissolution rate :math:`\rho_{Si}^T` follows the temperature dependen \paragraph{Calcium carbonate pool (:math:`\mathrm{CaCO}_{3\,det}`)} Nanophytoplankton loses :math:`CaCO_3` to the detrital :math:`CaCO_3` compartment via excretion, respiration, aggregation and grazing. Dissolution of -:math:`CaCO$_3` leads to an increase in :math:`\mathrm{DIC}` and alkalinity (see section +:math:`CaCO_3` leads to an increase in :math:`\mathrm{DIC}` and alkalinity (see section :ref:`sec_carbchem`). .. math:: @@ -900,7 +900,7 @@ function (:math:`f_T`, see Eq. :eq:`eq_arr`). Dissolved Organic Carbon (:math:`\mathrm{DOC}`) ----------------------------------------------- -$\mathrm{DOC}$ sources are carbon excretion by nanophytoplankton, diatoms and +:math:`\mathrm{DOC}` sources are carbon excretion by nanophytoplankton, diatoms and heterotrophs, and degradation of :math:`\mathrm{C}_{det}`. Remineralization of :math:`\mathrm{DOC}` leads to a transfer of carbon from :math:`\mathrm{DOC}` to :math:`\mathrm{DIC}`.