added support for spack-stack on hera

Author: pvelissariou1

NEMS

@@ -26,20 +26,21 @@ myDIRS="${myDIRS} . ${APPMODS_DIR}"
 ####################
 ### (1) Load all needed environment modules.
 module purge
-module load cmake
 
-module use /scratch2/STI/coastal/common/apps/modulefiles
-module load hpc-common
+module use /scratch1/NCEPDEV/nems/role.epic/spack-stack/spack-stack-1.5.1/envs/unified-env-rocky8/install/modulefiles/Core
 
-#module load hpc-intel/19.0.5.281 hpc-impi
-#module load hpc-intel/2020.2 hpc-impi
-module load hpc-intel/2022.1.2 hpc-impi
-#module load hpc-intel/2022.3.0 hpc-impi
+module load stack-intel/2021.5.1
+module load stack-intel-oneapi-mpi/2021.5.1
 
-module load hdf5/1.10.9 netcdf/4.7.4
-module load proj/4.8.0
-module load parmetis/4.0.3
-module load esmf/8.3.1
+module load cmake/3.23.1
+
+#module load jasper/2.0.32
+#module load zlib/1.2.13
+#module load libpng/1.6.37
+
+module load hdf5/1.14.0
+module load netcdf-c/4.9.2 netcdf-fortran/4.6.0
+module load esmf/8.5.0
 
 
 ###################

modulefiles/envmodules_intel.hera

@@ -0,0 +1,95 @@
+#!/usr/bin/env bash-*-Shell-script-functions*-
+
+###########################################################################
+### Module File to load the required environment modules for the NEMS application
+###
+### Author: Panagiotis Velissariou <[email protected]>
+### Date:   June 26 2021
+###########################################################################
+
+
+####################
+# Get the directory where the script is located
+if [[ $(uname -s) == Darwin ]]; then
+  myDIRS="$(cd "$(dirname "$(grealpath -s "${BASH_SOURCE[0]}" )" )" && pwd -P)"
+else
+  myDIRS="$(cd "$(dirname "$(realpath -s "${BASH_SOURCE[0]}" )" )" && pwd -P)"
+fi
+myDIRS="${myDIRS} . ${APPMODS_DIR}"
+####################
+
+
+# This script is responsible for loading modules that are
+# compatible with the NUOPC Layer version used in NEMS.
+
+
+####################
+### (1) Load all needed environment modules.
+module purge
+module load cmake
+
+module use /scratch2/STI/coastal/common/apps/modulefiles
+module load hpc-common
+
+#module load hpc-intel/19.0.5.281 hpc-impi
+#module load hpc-intel/2020.2 hpc-impi
+module load hpc-intel/2022.1.2 hpc-impi
+#module load hpc-intel/2022.3.0 hpc-impi
+
+module load hdf5/1.10.9 netcdf/4.7.4
+module load proj/4.8.0
+module load parmetis/4.0.3
+module load esmf/8.3.1
+
+
+###################
+### (2) Set some environments varaiables related to the loaded
+###     modules and required to compile the NEMS application properly.
+funcs="$( find ${myDIRS} -type f -iname "PlatformFuncs" | head -n 1 )"
+if [ -f "${funcs}" ]; then
+  source "${funcs}"
+
+  get_env_hdf5
+  get_env_netcdf
+fi
+unset funcs myDIRS
+
+
+########## BEG:: PLATFORM CUSTOMIZED SETTINGS ##########
+# Is this needed in all systems?
+# If file locking is not allowed in the filesystem, or the
+# HDF5 locking mechanism is not compatible with the
+# OS locking mechanism, then HDF5 (>=1.10.x) throws errors like
+# access denied when trying to READ/WRITE NetCDF files.
+# On some platforms HDF5 locking is disabled on other it is not.
+# If you experience these problems uncomment the next line
+# (this should be done automatically when loading this file - todo).
+#export HDF5_USE_FILE_LOCKING=FALSE
+
+if [ -z "${NETCDF_CONFIG}" ]; then
+  export NETCDF_CONFIG=${NETCDF_HOME:+${NETCDF_HOME}/bin/nc-config}
+fi
+
+if [ -z "${NETCDF_INCDIR}" ]; then
+  export NETCDF_INCDIR=${NETCDF_INC:+${NETCDF_INC}}
+  if [ -z "${NETCDF_INCDIR}" ]; then
+    export NETCDF_INCDIR=${NETCDF_HOME:+${NETCDF_HOME}/include}
+  fi
+fi
+
+if [ -z "${NETCDF_LIBDIR}" ]; then
+  export NETCDF_LIBDIR=${NETCDF_LIB:+${NETCDF_LIB}}
+  if [ -z "${NETCDF_LIBDIR}" ]; then
+    export NETCDF_LIBDIR=${NETCDF_HOME:+${NETCDF_HOME}/lib}
+  fi
+fi
+
+if [ -z "${ESMFMKFILE}" ]; then
+  echo "The variable ESMFMKFILE is not set. Please load the esmf module for your platform"
+  echo "Exiting ..."
+  exit 1
+else
+  export ESMFMKFILE=${ESMFMKFILE}
+fi
+########## END:: PLATFORM CUSTOMIZED SETTINGS ##########
+