Skip to content

Issues: nloyfer/wgbs_tools

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

18 Open 54 Closed
18 Open 54 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Custom annotation file to use with wgbstool convert function
#89 opened Dec 6, 2024 by almanza-d
Different coverages for different --np_tresholds for ONT data.
#87 opened Oct 22, 2024 by ljcousse
define the cell type-specific markers, as defined in the Nature paper
#83 opened Aug 22, 2024 by gyuhee0928
Bioconda integration
#80 opened Jul 4, 2024 by Manojbioinfo
Galaxy wrapper
#79 opened Jul 3, 2024 by joachimwolff
modbam reads and hardclipping
#75 opened May 30, 2024 by jts
Nanopore wgbstools vis
#69 opened Apr 18, 2024 by AzlanNI
1
beta2bed warning - incomatible (sic) with current genome reference
#67 opened Apr 5, 2024 by cb4github
Failed compiling cview
#65 opened Mar 29, 2024 by MinS1
6
Question regarding generating bigger blocks in brain .beta files wgbstools segment
#61 opened Jan 23, 2024 by DieStok
1
issue running wgbstools mix_pat
#55 opened Oct 19, 2023 by tomh1lll
bam2pat FileNotFoundError
#54 opened Oct 4, 2023 by qyJING123
1
bam2pat for nanopore data has some problem in recognising CIGARX string
#52 opened Oct 2, 2023 by vinodsinghjnu
2
bam2pat support for nanopore data
#48 opened Aug 11, 2023 by Rodcarlessi
9
Non-standard 1-based start position in bed files
#37 opened Apr 14, 2023 by GWW
convert .fractional.bw data to pat or beta
#30 opened Jan 31, 2023 by avilella
Consider more permissive license for .pat/.beta formats?
#23 opened Jan 5, 2023 by semenko
paired test for find_markers enhancement New feature or request
#14 opened Sep 30, 2022 by e-manduchi
@yonniejon
ProTip! Updated in the last three days: updated:>2024-12-09.