Color heterogeneity

[tkcaccia]

Is your feature request related to a problem? Please describe

Can you please include a standard deviation of the marker intensity inside the cell segmentation?
This value could be associated to nuclear morphology

Describe the solution you'd like

No response

Describe alternatives you've considered

No response

Additional context

No response

[SPPearce]

Hi,
I don't understand what your comment is related to, can you please elaborate

[tkcaccia]

I assume the quantification module in MCMICRO sums the intensity values of all pixels within each segmented cell. In addition to this total intensity, would it be possible to also obtain the standard deviation of pixel intensities within each cell?

[jmuhlich]

Yes, we will add support for more statistical aggregate functions for the marker intensity metrics.