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I run successfully the prep step with my 20 samples (1-2Gb each)
When I run the align step in local mode
rail-rna align local --gzip-intermediates --gzip-level 9 -x $bowtie_hg38_dir $bowtie2_hg38_dir -i $prep_dir -m $manifest_file --log $output_log -o $output_dir -d tsv,bw,jx -f \
I get the following error:
Some of the log files contain this error:
PS: If I keep the default value of gzip then I get the error: gzip stout no space left on device (while there is still a lot of space available)
Have you ever encountered this issue? What can be the cause? How can I deal with it?
I attached here a screenshot with the log errors that I got.
Thank you in advance. Best Regards, Gianluca
The text was updated successfully, but these errors were encountered:
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I run successfully the prep step with my 20 samples (1-2Gb each)
When I run the align step in local mode
rail-rna align local
--gzip-intermediates --gzip-level 9
-x $bowtie_hg38_dir $bowtie2_hg38_dir
-i $prep_dir -m $manifest_file
--log $output_log -o $output_dir
-d tsv,bw,jx -f \
I get the following error:
Some of the log files contain this error:
PS:
If I keep the default value of gzip then I get the error:
gzip stout no space left on device (while there is still a lot of space available)
Have you ever encountered this issue?
What can be the cause? How can I deal with it?
I attached here a screenshot with the log errors that I got.
Thank you in advance.
Best Regards,
Gianluca
The text was updated successfully, but these errors were encountered: