This repository includes the codes and analysis instructions for the manuscript: 'Decoding the Archetypes and Ecotypes of Triple-Negative Breast Cancer in Response to Chemotherapy'.
| Folder | Purpose | Visibility |
|---|---|---|
| install | Instructions to install the required software | public |
| analysis | Computational analysis | public |
| data | Processed Seurat objects to facilitate data analysis | private |
| supplementary data | Supplementary tables in our manuscript | private |
| other data | Public data we used in this study | public |
https://cellxgene.cziscience.com/datasets/xxx (in preparation)