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Improve implementation of reordering within estimate_joint #118

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sangeetabhatia03 opened this issue May 21, 2021 · 0 comments

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sangeetabhatia03 commented May 21, 2021

Current implementation works but is quite clunky. I think we could improve it using something like the following:

reorder_incid (Reorder based on transmissibility, returns say the index of the max transmissible variant and reordered incidence)
all operations are now on reordered incid
then reorder_results, with the index from step 1

This also has the advantage that we can reformat results in the lasts tep to look exactly like results from EpiEstim.

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