Install with pip on command line:
pip install -e .
Run GraphMiner tool:
GraphMiner -i _inputfile_
Other features:
-mtc/--MultipleTestCorr {bonferroni, fdr_bh, holm} - default = fdr_bh
-o/--outputfolder [str] - default = 'GraphMinerResults'
-size/--moleculesize [int] - default = 60
-sep/--separatorCSVfile [str] - default = ','
-time/--TimeOutTimer [int] - default = 30
-pval/--PValue [float] - default = 0.05
-dend/--CutOffDendrogram [float] - default = 1.5